Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0285 ATGAGTTTCAGGGAAGATAGCGGAGAAGGAAGGGACCTTCAGAAACCGTTTCTCCACACGGGGAGCTGGTACAAAATGGGTTCAAGACAGTCCAGTATCATGGGCTCTTCCACTCAGGTTATGCGCGATGGCTCTGTCTCCGTCCTCTTCTGCGTCCTCATCGTTGCCTTGGGCCCAATCCAATTCGGCTTCACGAGTGGCTATTCTTCTCCAACGCAAGGGGCTATAGTTCGCGATCTAAAGCTCACGGTTTCGGAGAAACTTGTTAAAGGAAAGTCTATGAATGTTGCGTTGCAGTCATTGATGATTGCTGCGATTCCCAATATAATAGGGTGGCTCGCCATTTCTTTCGCCAAAGACTCCTCGTTTTTGTTTATGGGAAGGTTGTTGGAAGGTTTTGGCGTTGGGATTATATCTTATGTGGTGCCTGTTTATATAGCTGAGATTGCACCCGAAAACATGAGAGGTAGCCTTGGATCAGTGAACCAGCTCTCTGTTACAATTGGAATTTTGCTGGCTTATCTGTTGGGCCTTTTTGTCAACTGGAGAGTGCTTGCCATTCTTGGAATTTTGCCTGGTACAGTATTAATACCTGGATTATTTTTCATACCAGAATCCCCCAGATGGTTGGCCAAGATGGGGATGACAGATGAGTTTGAGACTTCGTTGCAAGTGTTACGAGGATTTGAGACAGATATATCTGTTGAAGTACATGAAATTAAGAGATCTGTGGCTTCAACAGGAAAGAGAGTTGCAATCCGATTTGCGGATCTCAAGAGGAAAAGATATTGGTTCCCCTTAATGGTAGGAATTGGATTACTTGTTCTTCAGCAATTGACTGGTATCAATGGAGTTTTATTCTATTCAACTACCATATTTGCAAATGCAGGAATTTCATCCAGCGATGCTGCTACAGTTGGACTTGGAGCTATTCAGGTCATAGCAACAGGTATTGCTACTTGGTTGGTGGATAAAAGTGGCCGGAGGCTGCTGCTAATAATATCCTCGTCTATAATGACAGTTAGCCTTCTCATTGTTTCTATAGCATTCTATCTGGAGGGGGTCGTATCAGAGGATTCACATCTATATAACATTTTGGGAATACTTTCTGTTGTTGGACTCGTGGTTATGGTGATTGGGTTCTCTCTAGGACTTGGACCCATCCCTTGGCTTATAATGTCTGAGATACTTCCAGTGAATATAAAGGGCCTTGCTGGCAGTATAGCAACAATGGGAAATTGGCTGATTTCGTGGGTGATCACTATGACTGCTAACTTGCTTTTGAATTGGAACAGTGGAGGGACATTTACAATCTATACAGTGGTAGCTGCCTTTACTGTTGCTTTTACAGCGTTGTGGGTCCCTGAGACCAAAGGAAGAACATTGGAAGAAATTCAGTTTTCCTTTAGGTAG 1413 0.4374 MSFREDSGEGRDLQKPFLHTGSWYKMGSRQSSIMGSSTQVMRDGSVSVLFCVLIVALGPIQFGFTSGYSSPTQGAIVRDLKLTVSEKLVKGKSMNVALQSLMIAAIPNIIGWLAISFAKDSSFLFMGRLLEGFGVGIISYVVPVYIAEIAPENMRGSLGSVNQLSVTIGILLAYLLGLFVNWRVLAILGILPGTVLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFETDISVEVHEIKRSVASTGKRVAIRFADLKRKRYWFPLMVGIGLLVLQQLTGINGVLFYSTTIFANAGISSSDAATVGLGAIQVIATGIATWLVDKSGRRLLLIISSSIMTVSLLIVSIAFYLEGVVSEDSHLYNILGILSVVGLVVMVIGFSLGLGPIPWLIMSEILPVNIKGLAGSIATMGNWLISWVITMTANLLLNWNSGGTFTIYTVVAAFTVAFTALWVPETKGRTLEEIQFSFR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0285 470 CDD MFS_GLUT6_8_Class3_like 49 464 IPR044775 GO:0008643|GO:0051119
Apr3g0285 470 PANTHER - 14 468 - -
Apr3g0285 470 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 14 468 - -
Apr3g0285 470 Gene3D MFS general substrate transporter like domains 42 470 IPR036259 -
Apr3g0285 470 TIGRFAM SP: MFS transporter, sugar porter (SP) family 99 465 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr3g0285 470 Pfam Sugar (and other) transporter 100 466 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr3g0285 470 PRINTS Sugar transporter signature 59 69 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr3g0285 470 PRINTS Sugar transporter signature 277 287 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr3g0285 470 PRINTS Sugar transporter signature 371 392 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr3g0285 470 PRINTS Sugar transporter signature 394 406 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr3g0285 470 SUPERFAMILY MFS general substrate transporter 51 466 IPR036259 -
Apr3g0285 470 ProSitePatterns Sugar transport proteins signature 2. 130 155 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr3g0285 470 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 458 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0285 Apr-Chr3 5538237 5543340 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0285 1 470 Organic Solute Cotransporters AT1G75220 75.410 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0285 K03444 - gmx:100813399 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0285 3 5538237 5543340 Apr3g0285 3 5538237 5543340 ECH
Apr3g0285 3 5538237 5543340 Apr7g1024 7 17301975 17307574 ECH