Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1003 ATGATACCTGGCATTGTCTCAAGGCTGAATGCTACTATTCACTGTCGCATTCGAGAAGCAATAACAAGACAACAAGGAATGCGAACATCCTTGTACAGGAATTCAGCTGTGTCTCTTTCTTCACTGCATTCAACTTCCTTTTTGTCTGGTTCGATTCATTGCTCTTTAAGCCACATGTTCAATACAAAATCAATGGCTACTTCACCTTCCAATGCTGTGGTGGGAGATGTTTATGTTGATGATTTGATCTCACGTTGCGGCAGTGTGCTAGATTTCACAAAGCCCGCTGTTGTGTACTTGAAAGAAAGAACTCATAAAGGTCGGCTGAGAGCTAGTATGAATCTAAGGATATCACAACCTTTGTATGGTCCTTTGAGTTTTGGGTGTTCCACTTTTGATGCTAATTGGAGGATCCGGAATTCGAGTTTGCTTCATGGACCATGGCTCAAGAATTTATCTTCCTCTTATTCTGCTTGCTACTCAGCCCGGGCTGCACATGATGTCTCATTTGATGGCTGCCCTTCGGATGAACAGTTTGTGAATTCGTCTTTTTCCCCTGACATAACTACTGTTGGTGGCAAGGCCTTAAAGATGTATTCAGGATCTTGTTACCTACCGCATCCAGATAAGGAGGAGACAGGAGGAGAGGATGCTCATTTTATTTGCACAGATGAACAAGCAATTGGTGTTGCTGATGGTGTAGGTGGCTGGGCAGATGTTGGCGTTAATGCAGGACTGTTTGCCCGGGAACTTATATCCAATTCAGTAAGAGCAATTCAAGAGGAGCCTGAAGGTTCTTTTGATCCAACGAGGGTGTTAGAGAAAGCTCACTCAAATACAAAGGCCAATGGTTCATCAACGGCTTGTATCATTGCCCTCACCCATAAGGGACTACATGCTATTAATTTGGGTGACAGTGGATTTATTGTGGTTAGAGATGGATGCACCATTTTCAGGTCCCCTGTTCAACAGCATAACTTCAATTTCACATATCAATTGGAGAGTGGCAATAATGGAGGTGATCTCCCCAGCTCTGGTGAGGTTTTCACTATACCTGTTGCTCCAGGAGATGTTGTTATTGCTGGAACAGATGGTTTATTTGATAACTTGTACAACAATGAGATAATTGCAGTTGTTGTACCTGCAGTTAGAGCTGGACTAGAACCCCAAGTAACTGCTCAGAAAATAGCAGCACTGGCTCGTCAGCGAGCGATGGACAGGGATAGGCAAACACCGTTTTCTACGGCTGCTCAGGAAGCCGGATTCCTTTTTTATGGCGGCAAACTTGATGACATAACAGTTGTTGTGTCTTACATATCCAGCTCAATCAGTGAATGA 1338 0.4372 MIPGIVSRLNATIHCRIREAITRQQGMRTSLYRNSAVSLSSLHSTSFLSGSIHCSLSHMFNTKSMATSPSNAVVGDVYVDDLISRCGSVLDFTKPAVVYLKERTHKGRLRASMNLRISQPLYGPLSFGCSTFDANWRIRNSSLLHGPWLKNLSSSYSACYSARAAHDVSFDGCPSDEQFVNSSFSPDITTVGGKALKMYSGSCYLPHPDKEETGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFARELISNSVRAIQEEPEGSFDPTRVLEKAHSNTKANGSSTACIIALTHKGLHAINLGDSGFIVVRDGCTIFRSPVQQHNFNFTYQLESGNNGGDLPSSGEVFTIPVAPGDVVIAGTDGLFDNLYNNEIIAVVVPAVRAGLEPQVTAQKIAALARQRAMDRDRQTPFSTAAQEAGFLFYGGKLDDITVVVSYISSSISE* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1003 445 ProSiteProfiles PPM-type phosphatase domain profile. 199 439 IPR001932 -
Apr7g1003 445 SUPERFAMILY PP2C-like 202 437 IPR036457 -
Apr7g1003 445 SMART PP2C_SIG_2 198 439 IPR001932 -
Apr7g1003 445 SMART PP2C_4 189 437 IPR001932 -
Apr7g1003 445 Gene3D - 207 335 IPR036457 -
Apr7g1003 445 PANTHER PROTEIN PHOSPHATASE 51 444 - -
Apr7g1003 445 PANTHER PROTEIN PHOSPHATASE 2C 51 444 IPR039123 -
Apr7g1003 445 Pfam Stage II sporulation protein E (SpoIIE) 226 437 IPR001932 -
Apr7g1003 445 Gene3D - 342 444 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1003 Apr-Chr7 17060074 17063180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1003 K17508 - gmx:100785804 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1003 7 17060074 17063180 Apr7g1003 7 17060074 17063180 ECH
Apr3g0262 3 5097405 5102564 Apr7g1003 7 17060074 17063180 ECH
Apr7g1003 7 17060074 17063180 Apr3g0262 3 5097405 5102564 PCT