Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0262 ATGGCTGCTTCGGCTTCGCATGTTGTGCTTCTAGGAGATGTTTGTTTGGATGACGTCACTGCTAAGCCTTGCGGTGTTCACTTCAGAGACACAACACTTAGTAAAGGAGGGTTGAGAGCGAGCGTGAATCTCAGAAGACCACAAACGTTAAGGGGTGTTTTGAATTTTGGGTGTTCTACAAGTTGGAGGCATTGGAATACGAGTTCGCTTCTTCAGCCCAAGAATACGTCCTTCGCTTGCTTCTCCTCTGGGGCCGCGCGTGATGTTCAAAACCTTGCAACCTCAACCTTTTCAGTCCACCAAACGAATGTTGGTGGCGAGAGGTTGAAGCTGTTTTCAGGGGCATGTTACCTTCCGCATCCGGATAAGGAGGACACGGGTGGAGAGGATGCGCATTTTATTTGCACAGAGGAACAAGTAATTGGTGTTGCAGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATGCTGGAGTGTTTGCTCGAGAACTTATGTCCTATTCTGTCAAAGCAATTGAAGAAGAGCCCAAAGGTTCTATTAATCCAGCAAGGGTCTTAGAGAAGGCTCACTCATGTACTAAGGCCAAGGGTTCATCAACTGCTTGTATTATTGCCCTTACAGATGCGGGACTACATGCCATTAATTTGGGTGACAGTGGGTTCATTGTGGTTAGAGATGGAAGCACCATTTTCAGGTCACCTGTTCAGCAGCATGGCTTCAATTTTACTTATCAATTGGAGAGTGGCAATGGAGGTGATCTACCAAGCTCTGGTGAGGTCTTTACAATACCTGTTGCCCCAGGGGATGTCGTCATCGCTGGAACAGATGGATTGTTTGACAATCTGTACAACAATGAGGTTGCTGAAATTGTTCTACAGGCAGTTAGCGCTGGACTAGAACCTCAAATAACTGCACAGCAGATAGCAGCATTGGCTCGTCAGCGAGCACTGGACAGGAATAGGCAGACACCATTTTCTACTGCTGCTCAGGAGGCTGGGTACCATTTTTATGGGGGCAAGCTTGATGACATAACAGTTGTTGTGTCATACATAACCAGCTCAACATGTGCATATGAAGAGCATCTATGCCAACGGATATAG 1101 0.4696 MAASASHVVLLGDVCLDDVTAKPCGVHFRDTTLSKGGLRASVNLRRPQTLRGVLNFGCSTSWRHWNTSSLLQPKNTSFACFSSGAARDVQNLATSTFSVHQTNVGGERLKLFSGACYLPHPDKEDTGGEDAHFICTEEQVIGVADGVGGWADVGVNAGVFARELMSYSVKAIEEEPKGSINPARVLEKAHSCTKAKGSSTACIIALTDAGLHAINLGDSGFIVVRDGSTIFRSPVQQHGFNFTYQLESGNGGDLPSSGEVFTIPVAPGDVVIAGTDGLFDNLYNNEVAEIVLQAVSAGLEPQITAQQIAALARQRALDRNRQTPFSTAAQEAGYHFYGGKLDDITVVVSYITSSTCAYEEHLCQRI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0262 366 Gene3D - 254 359 IPR036457 -
Apr3g0262 366 SMART PP2C_4 102 349 IPR001932 -
Apr3g0262 366 PANTHER PROTEIN PHOSPHATASE 1 355 - -
Apr3g0262 366 SUPERFAMILY PP2C-like 115 348 IPR036457 -
Apr3g0262 366 PANTHER PROTEIN PHOSPHATASE 2C 1 355 IPR039123 -
Apr3g0262 366 Gene3D - 122 240 IPR036457 -
Apr3g0262 366 ProSiteProfiles PPM-type phosphatase domain profile. 112 351 IPR001932 -
Apr3g0262 366 Pfam Protein phosphatase 2C 128 310 - -
Apr3g0262 366 SMART PP2C_SIG_2 124 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0262 Apr-Chr3 5097405 5102564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0262 K17508 - gmx:100784475 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0262 3 5097405 5102564 Apr3g0262 3 5097405 5102564 ECH
Apr3g0262 3 5097405 5102564 Apr7g1003 7 17060074 17063180 ECH
Apr7g1003 7 17060074 17063180 Apr3g0262 3 5097405 5102564 PCT