Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0989 ATGAGTTCTGTGAATATCGGAACCTGGCCTCGTCCCAACCAAAGAACCAGATCCATTCCCGCAACTCAAAACCCCTCTCTTCACGCTCTCAAAACGCTTCCCATTTTCCCCAAACGACGAAGAGCAAAGTTAATCTATTCTTTTTCTCCTATCTCTGTCTCTGCAGTGCTTGCTAAGGAAGACACTGTGAGAGACGAAGAAATTCAAGACTTCGATTTCAAGGCTTACATGATCCAAAAAGCCAACACAGTAAACCAAGCCTTGGACCAAGCTATTTCGCTGAAGGATCCAGAGAAGATCCACGAGGCCATGCGCTACTCCCTCCTCGCCGGCGGCAAGCGTGTCCGCCCGGTGCTCTGTATCGCCGCCTGCGAGCTCGTCGGCGGCAGAGAAGAAACCGCAATCCCCGCCGCCTGCGCCGTCGAGATGATCCACACCATGTCGCTGATTCACGACGACTTGCCCTGCATGGACAACGACGACCTCCGGCGAGGAAAACCGACCAACCACAAGGTCTTCGGCGAGGACGTGGCGGTCCTCGCCGGCGACGCCCTGCTGGCGTTGGCGTTCGAGCACGTGGCGGTGTCGACGAAGGACGTGTCACCGGCGAGGGTGGTTCGTGCGATTGGGGAGTTAGCGAAGTCGATTGGTAAGGAAGGTCTTGTTGCGGGGCAAGTTGTGGATATAAATTCTGAAGGGTTGTCGAATGTGGGTTTGGAGAGACTCGAATTTATCCATCTACACAAAACGGCAGCGTTATTGGAATCTTCGGTTGTGTTGGGAGGGATAGTGGGTGGTGGTTCGGACGAGGAAGTGGAGAGGTTAAGGAAGTTTGCCAGGTCGATTGGGTTGTTGTTTCAGGTTGTGGATGATATTCTTGATGTTACTAAGTCGTCTGAGGATTTGGGGAAGACTGCGGGGAAGGACTTGGTCGCCGATAAGGTCACATATCCTAAGCTTTTAGGGATACCCAAATCTAAGGAATTTGCTGATAAATTAATCAGTGATGCAAAGGAACAGTTGAGGGGGTTTCATCCGGAAAAGGCAGCTCCATTGTTTGCTTTAGCCAATTACATTGCTTACAGGCAAAATTAA 1095 0.5151 MSSVNIGTWPRPNQRTRSIPATQNPSLHALKTLPIFPKRRRAKLIYSFSPISVSAVLAKEDTVRDEEIQDFDFKAYMIQKANTVNQALDQAISLKDPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGREETAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLALAFEHVAVSTKDVSPARVVRAIGELAKSIGKEGLVAGQVVDINSEGLSNVGLERLEFIHLHKTAALLESSVVLGGIVGGGSDEEVERLRKFARSIGLLFQVVDDILDVTKSSEDLGKTAGKDLVADKVTYPKLLGIPKSKEFADKLISDAKEQLRGFHPEKAAPLFALANYIAYRQN* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0989 364 ProSitePatterns Polyprenyl synthases signature 1. 149 165 IPR033749 -
Apr7g0989 364 Pfam Polyprenyl synthetase 98 335 IPR000092 GO:0008299
Apr7g0989 364 CDD Trans_IPPS_HT 96 362 IPR000092 GO:0008299
Apr7g0989 364 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 38 364 - -
Apr7g0989 364 Gene3D Farnesyl Diphosphate Synthase 65 364 IPR008949 -
Apr7g0989 364 SUPERFAMILY Terpenoid synthases 74 345 IPR008949 -
Apr7g0989 364 SFLD Polyprenyl Transferase Like 75 362 - -
Apr7g0989 364 MobiDBLite consensus disorder prediction 1 22 - -
Apr7g0989 364 SFLD Isoprenoid Synthase Type I 75 362 - -
Apr7g0989 364 ProSitePatterns Polyprenyl synthases signature 2. 282 294 IPR033749 -
Apr7g0989 364 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 38 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0989 Apr-Chr7 16929023 16930121 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0989 K13789 - gmx:100778289 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0989 7 16929023 16930121 Apr7g0989 7 16929023 16930121 ECH
Apr3g0255 3 4831297 4834110 Apr7g0989 7 16929023 16930121 ECH
Apr7g0989 7 16929023 16930121 Apr3g0255 3 4831297 4834110 PCT