Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0255 ATGAGTGCTGTGAATCTTAACTCATGGGCACGCCCCAGTTTCATTTTGAACCAAGCAACGAGATCCAGATCCCCAACCTTTCATCTATTTCACGGTCTCACTAAGTTACCCATTTCCTCCATCACTGTTACAAAACCGCAAAGGCATAAACTTTCTTCTTCGTCTTCTTCTTGTTGTTCTTCTTCTTTCTCTTCCTACATGTTTCATAAAGCGAGCGCAGTCAACCAGGCGCTTGACGACGCCGTTTCGCTCCGCGAGCCACATAAGATCCACGAGGCTATGCGCTATTCTCTCCTCGCCGGCGGCAAACGCGTGCGGCCTGTCCTCTGTGTCGCCGCCTGCGAACTCGTTGGCGGCGCCGAGGCAACCGCGATGCCCGCCGCCTGCGCAATCGAGATGATCCACACCATGTCCCTCATCCACGACGACCTCCCTTGCATGGACAACGACGATCTCCGGCGAGGCAAGCCCACCAACCATAAGGTCTTCGGCGAGGACGTTGCGGTCCTCGCCGGCGATGCGCTTCTCGCCTTTGCCTTCGAGCACATCGCCGTCTCCACCGTCGGTGTGTCACCGGCGCGGATCGTGCGCGCAATTGGCGAGCTTGCGCGGTCGATCGGCGCCGAGGGACTCGTCGCTGGGCAAGTTGTCGACATAAATTCGGAAGGCTTGTCCGATGTGGGACTTGAAAGACTTGAGTTCATTCACCTTCATAAGACCGCGGCGTTGCTTGAAGGTGCCGTTGTTCTTGGTGCAATTCTGGGTGGCGGTTCTGATGATGAGGTTGAGAAATTGAGGAAATTTGCTAGGTATATAGGGTTGCTGTTTCAGGTTGTTGATGATATTCTTGATGTAACAAAGTCTTCACTAGAATTGGGGAAGACTGCGGGGAAAGACCTTGTGGCTGATAAGGTTACTTACCCTAAGCTTTTGGGGATTGAGAAATCTAAGGAGTTTGCGGAAAAATTGAATAAAGATGCACAGGATCAGCTTGTAGGATTTGACCCTGATAAGGCTGCTCCTTTGATTGCCCTAGCTAATTACATTGCTTATAGGCAAAACTAG 1065 0.5202 MSAVNLNSWARPSFILNQATRSRSPTFHLFHGLTKLPISSITVTKPQRHKLSSSSSSCCSSSFSSYMFHKASAVNQALDDAVSLREPHKIHEAMRYSLLAGGKRVRPVLCVAACELVGGAEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVGVSPARIVRAIGELARSIGAEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDDEVEKLRKFARYIGLLFQVVDDILDVTKSSLELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNKDAQDQLVGFDPDKAAPLIALANYIAYRQN* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0255 354 Pfam Polyprenyl synthetase 89 324 IPR000092 GO:0008299
Apr3g0255 354 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC-LIKE 32 354 - -
Apr3g0255 354 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 32 354 - -
Apr3g0255 354 SFLD Isoprenoid Synthase Type I 68 352 - -
Apr3g0255 354 Gene3D Farnesyl Diphosphate Synthase 56 354 IPR008949 -
Apr3g0255 354 SFLD Polyprenyl Transferase Like 68 352 - -
Apr3g0255 354 SUPERFAMILY Terpenoid synthases 65 332 IPR008949 -
Apr3g0255 354 ProSitePatterns Polyprenyl synthases signature 1. 139 155 IPR033749 -
Apr3g0255 354 CDD Trans_IPPS_HT 90 352 IPR000092 GO:0008299
Apr3g0255 354 ProSitePatterns Polyprenyl synthases signature 2. 272 284 IPR033749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0255 Apr-Chr3 4831297 4834110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0255 K13789 - gmx:100785539 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0255 3 4831297 4834110 Apr3g0255 3 4831297 4834110 ECH
Apr3g0255 3 4831297 4834110 Apr7g0989 7 16929023 16930121 ECH
Apr7g0989 7 16929023 16930121 Apr3g0255 3 4831297 4834110 PCT