Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0984 ATGGCCACTGCTGCACCCAAGTGTTTGTGTCTCATCCTCATTATCATCGTTTCCATTAACGCCACCACAGCCACAACTCAACGCTTCAAACAAGCCCCAAAATTCTACAACTCCCCAAACTGTCCAACCATTGCCCTCCAACAGAACGACACGTGTTCCGGCGATGCAGTACACGTGGCAATGACACTCGACGTCACCTACCTTCGGGGTTCCATGGCCGCCATCCTCTCCGTTCTCCAACACTCTTCTTGTCCTGAAAACATCATCTTCCATTTCGTCACCGCGGCATCCAAAGCCTCTTCCACCGCTCTCCTCAACCGCACCCTCTCCAACTCCTTCCCTTATTTGAAATTCCAAATCTACCCTTTCGACGACCACGCCGTCGCGGGACTCATTTCCACCTCCATCCGCTCCGCATTGGATTGCCCTCTCAACTACGCTCGTAATTACATGGCCAATCTTCTCCCTCTCTGCGTCCGCAACATCGTCTACCTCGACTCCGACCTCGTACTCGTCGACGACATTGCAAAACTCGCTGCTACCCCTCTCGGCGAAAACTCCGTCCTCGCTGCCCCCGAATACTGCAACGCCAACTTCAGCGCGTACTTCACACCATCTTTCTGGTCGAATCCTTCTCTTTCCCTCACCTTCGCGGGGCGAAGGCCCTGTTATTTCAACACCGGTGTGATGGTAATTGATCTAGAACGGTGGCGGGCCGGGGATTACACTACTAAAATCCAGGAATGGATGGAGCTCCAGAAGAGAATGAGGATCTATGAGCTTGGGTCGTTGCCGCCGTTTCTGCTTGTTTTCGCGGGGAATATAGGTCCGGTGGATCACAGGTGGAACCAGCATGGGCTTGGGGGGGATAACTTCCGCGGGCTTTGCAGGGACTTGCATCCGGGCCCGGTGAGTCTGTTGCATTGGAGTGGGAAGGGGAAGCCGTGGGCCAGGCTAGACGCGAACCGCCCTTGCCCCTTGGATGCGTTATGGGCTCCCTACGATCTTCTGGAGACACCTTTCGCTCTCGAAGCATAG 1038 0.5482 MATAAPKCLCLILIIIVSINATTATTQRFKQAPKFYNSPNCPTIALQQNDTCSGDAVHVAMTLDVTYLRGSMAAILSVLQHSSCPENIIFHFVTAASKASSTALLNRTLSNSFPYLKFQIYPFDDHAVAGLISTSIRSALDCPLNYARNYMANLLPLCVRNIVYLDSDLVLVDDIAKLAATPLGENSVLAAPEYCNANFSAYFTPSFWSNPSLSLTFAGRRPCYFNTGVMVIDLERWRAGDYTTKIQEWMELQKRMRIYELGSLPPFLLVFAGNIGPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLETPFALEA* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0984 345 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 58 324 IPR029044 -
Apr7g0984 345 PANTHER HEXOSYLTRANSFERASE 9 345 - -
Apr7g0984 345 Pfam Glycosyl transferase family 8 58 318 IPR002495 GO:0016757
Apr7g0984 345 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 9 345 - -
Apr7g0984 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 57 336 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0984 Apr-Chr7 16883189 16884514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0984 11 343 Glycosyltransferase AT3G50760 71.429 2.27e-180 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0984 K20893 - gmx:100783054 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0984 7 16883189 16884514 Apr7g0984 7 16883189 16884514 ECH
Apr3g0246 3 4510306 4511295 Apr7g0984 7 16883189 16884514 ECH
Apr7g0984 7 16883189 16884514 Apr3g0246 3 4510306 4511295 PCT