Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0983 ATGAGAGAGACACAAGTCTCTTACTGCGTGAGCGAGAGTAAACCCTGCGTGGGTTGGGTTGAGAAATACTTCAGTGACTGTCTCTGCAATTTAAATGATGACATATCCTTCGGCTTTGGGTTGATTAGTCTAATATGTTGGGGAGTCGCAGAAATTCCTCAAATAATTACCAACTTTCGCGCTAAGTCTACTCATGGAGTCTCCCTTGCCTTTCTCCTCACTTGGGTCGCCGGAGATATATTCAACCTCGTCGGTTGCCTTCTGGAACCAGCTACGTTGCCGACCCAGTACTATACAGCTCTGCTTTACACAATCACTACTATCGTATTAGTTCTGCAAAGTTTCTACTATGACTACATCTATAAATGGTGCAAGTGTCATCGGAAGATCGACGCGGAAAAGGCTGATGAAGAGGAGAAAAAACCTTTGAGACCGAAATTGGGCTACGAGTCAGGAATTCCAATACAAAATGGTGGAACCAGAGCAACACCTCGACGGGAGTACTACTATAGGTCAGCGAGATCATTGGCTGGTAATGATACCCCACCATTGGGTAGCTACTTGAGAGGTGCTAGAAGTGTCCCTTCAGCCATGGAACGGAACAATGATTCGTCTTCTGATGATGAGGCACCTCCACTTTCCTCTACACAACCTAGACCCATCCCCCGCTCTGTCCCTGCAAGTTACGGAACTTTTCTAGCAGCATCTTTAAACTTGCCACGACAGGGTAATGCTTTGAGGGAGGGATACATAAGATTGAGTGGAAGAAAACTACTCTTGCAGGAACAAGAAATGCACAGTGCTTTGGGTCAATGGTTAGGATGGTTCATGGCTGCTATTTATATGGGTGGCCGCCTCCCTCAAATATGGTTGAATATTAAACGAGGGAGCGTGGAGGGCCTAAATCCTCTTATGTTCATGTTTGCACTGATCGCCAATGCCACATATGTGGGAAGTATTCTTGTACGAACAACCGAATGGGAAAGCATCAAAGCCAATATGCCATGGTTGTTGGATGCCATAGTTTGCGTGGCATTGGACCTATTCATAATCTTGCAGTACGCCAACTATAGATACCTTCGGCAGAGAGCAGAAAACGACGGTGATTATGGAAACTACAAAGAAGCCATAAAAAGTGTTGTGTCTTGA 1149 0.4543 MRETQVSYCVSESKPCVGWVEKYFSDCLCNLNDDISFGFGLISLICWGVAEIPQIITNFRAKSTHGVSLAFLLTWVAGDIFNLVGCLLEPATLPTQYYTALLYTITTIVLVLQSFYYDYIYKWCKCHRKIDAEKADEEEKKPLRPKLGYESGIPIQNGGTRATPRREYYYRSARSLAGNDTPPLGSYLRGARSVPSAMERNNDSSSDDEAPPLSSTQPRPIPRSVPASYGTFLAASLNLPRQGNALREGYIRLSGRKLLLQEQEMHSALGQWLGWFMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFMFALIANATYVGSILVRTTEWESIKANMPWLLDAIVCVALDLFIILQYANYRYLRQRAENDGDYGNYKEAIKSVVS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0983 382 PANTHER PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN 5 378 - -
Apr7g0983 382 MobiDBLite consensus disorder prediction 197 213 - -
Apr7g0983 382 SMART ctns 283 314 IPR006603 -
Apr7g0983 382 SMART ctns 49 80 IPR006603 -
Apr7g0983 382 Pfam PQ loop repeat 35 91 IPR006603 -
Apr7g0983 382 Pfam PQ loop repeat 269 327 IPR006603 -
Apr7g0983 382 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 378 - -
Apr7g0983 382 MobiDBLite consensus disorder prediction 195 224 - -
Apr7g0983 382 MobiDBLite consensus disorder prediction 135 161 - -
Apr7g0983 382 Gene3D - 270 370 - -
Apr7g0983 382 Gene3D - 38 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0983 Apr-Chr7 16874313 16878349 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0983 K23678 - gmx:100815310 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0983 7 16874313 16878349 Apr7g0983 7 16874313 16878349 ECH
Apr7g0983 7 16874313 16878349 Apr3g0243 3 4457168 4462585 PCT