Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0243 ATGACACCTTCTTATTGTGTGAAGGAGAGAAAACCATGCCTGAGATGGGTTGAGATATACTTCAAAGACTGTCTTTGCAATTTGAAAGATGACATCTCATTCGGTTTAGGGCTCACAAGTCTAGTATTTTGGGGAGTAGCTGAAATTCCTCAAATAATCACTATTTTTCGTACCAAGTCAAGCCATGGACTTTCTCTGCTCTTTCTCCTCGCTTGGGTTGCTGGGGATATATGCAATTTAGTGGGTTGCCTTCTTGAACCGGCAACGTTGCCGACTCAGTATTACACAGCTCTGCTTTACACAGCCACGACGATCATATTAGTTGTGCAAATCATATATTATGACTACATCTACATATGGTACAGACATCGTCGGAAGGTTAACAACAAACGGCAGGATTATGAAGAGGAGAAAAAACCGTTGAAACCGCCGAAACCAAGTGACAAGTCAGGGATTCCAATACCAAAAGGCACACCCAAAACAGCACCTAGACGAGAGTACTTTTATATGTCAGCACGATCATTGGCTGGGAGTGGCACTCCACCCTGGGGTACCTACATAAGAGCTGCTAAGAGTGGCCCTTCAGCCATGGAATTATTGAAGGATGACTCTTCTTCCGAGGATGAAGCATCTCCAGCTTCCTCTGGAACTTCTGCAACCCAGCCTAGACCCATCCCTCGATCTGTGGCTGGAAGTTATGGAACATTTCTTGCAGCGACCGTTAATTTGCCTCTTAACGGTAATGCTTTGGGAGCAGAATACGTTGGATTTAGTGAAAGGAAGCTTTTGCAGGAGTACGAGAAACATAGTACATTTGGTCAATGGTTGGGATGGCTCATGGCTGCTATCTATATAGGTGGTCGGCTTCCTCAAATATGGATGAATATTAAAAGAGGCAGTGTCGAGGGCTTGAATCCTTTCATGTTTATCTTTGCATTGATCGCTAATGCCACTTACGTGGGAAGCATTCTTGTAAGAACAACGGAATTAGAAAGCATCAAAGCCAACATGCCATGGCTGTTGGATGCCGCATTTTGCGTGGCATTGGACCTTTTTATAATATTGCAGTACATCTACTATAGATACTTTCGAAGGAGAGAAGCAAGTGATCATGATGGAGACTACGAAGAATCGAGAAAAGCTGCTGCATTTTGA 1155 0.4372 MTPSYCVKERKPCLRWVEIYFKDCLCNLKDDISFGLGLTSLVFWGVAEIPQIITIFRTKSSHGLSLLFLLAWVAGDICNLVGCLLEPATLPTQYYTALLYTATTIILVVQIIYYDYIYIWYRHRRKVNNKRQDYEEEKKPLKPPKPSDKSGIPIPKGTPKTAPRREYFYMSARSLAGSGTPPWGTYIRAAKSGPSAMELLKDDSSSEDEASPASSGTSATQPRPIPRSVAGSYGTFLAATVNLPLNGNALGAEYVGFSERKLLQEYEKHSTFGQWLGWLMAAIYIGGRLPQIWMNIKRGSVEGLNPFMFIFALIANATYVGSILVRTTELESIKANMPWLLDAAFCVALDLFIILQYIYYRYFRRREASDHDGDYEESRKAAAF* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0243 384 MobiDBLite consensus disorder prediction 209 225 - -
Apr3g0243 384 Gene3D - 272 372 - -
Apr3g0243 384 Gene3D - 35 135 - -
Apr3g0243 384 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 382 - -
Apr3g0243 384 MobiDBLite consensus disorder prediction 132 162 - -
Apr3g0243 384 SMART ctns 286 317 IPR006603 -
Apr3g0243 384 SMART ctns 46 77 IPR006603 -
Apr3g0243 384 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 382 - -
Apr3g0243 384 Pfam PQ loop repeat 32 88 IPR006603 -
Apr3g0243 384 Pfam PQ loop repeat 273 326 IPR006603 -
Apr3g0243 384 MobiDBLite consensus disorder prediction 198 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0243 Apr-Chr3 4457168 4462585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0243 K23678 - gmx:100789634 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0243 3 4457168 4462585 Apr3g0243 3 4457168 4462585 ECH
Apr7g0983 7 16874313 16878349 Apr3g0243 3 4457168 4462585 PCT