LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr7g0952	ATGTCGCCGGCGGCCCACGAATATTCTTTTGCCGTCGAGTACGACGGACCTCCGCTAACCTACGATCTCCCTCGGGCGCTTCCTATTAGCGTCGACAGCATTCCGGTCGCCGCCGTCGTTTCCCAGGTTTCTCTTTCCGACGCTCTAGCACTGCCGGTCGTGCAGCCGCTCCTACCATCGCAACACCATCATCACGCCGTGAAGGAGCTCAGAACGCACGGCTCTGAGCCTAGGGTTTCCAAGGAACTCGAATTAGCGTCCGAGAGAACAGTCTCGCCTACTTCCGTGATCGCCTTTGAGCATCGAGCTTCCCAGAGCAACGTTTGCGAGCTCTCCGGCGAGTTGAGCAGCTCCGGCGCGTTCGAGTTCTCCAACGGGAACGATGGCTCCGGCGAGTTGTCTGATTTGGGTGACAGTTCGAGAGTGCTCGAAGATTCGAGCTCGCGTGAGTTACCAGCGGAAGGTAGAACAATAAGCAGAACTAGAACTGAAAGCTCTAGTACCGAGAGTTTGGATTTCAACGAGTTAAATCAGCAAGATTGGCCTTCCACTGAGTCAGTGTTGAGTTTAGAGTATCCGTCGACTCGGGTTTCTTCTTTGAAGGCTGAGGATTGCGATGGCAAGCGACCCCCTATTGTTACTTTCAATGTGGAATCTGATGATGATTTGGATGAGGAGTTTGATGTGGAGGACACTGTTACTAGACCGGTTAAAAGGGAACCTTTGACGAAGGGGAAGAAAGGGTCTTGTTATAGATGCTTCAAGGGGAATAGGTTTACTGAGAAGGAGGTTTGTCTTGTTTGTGATGCCAAGTATTGTAGTAATTGTGTGCTTAGAGCTATGGGGTCCATGCCAGAAGGTCGGAAATGTGTTACTTGCATTGGATTCCCTATTGATGAGTCCAAACGAGGCAATTTAGGGAAATGCTCTCGGATGCTAAAGCGGTTGCTTAATGAATTGGAGGTTCGGCAGATAATGAAGGCTGAGAGGTTTTGTGAAGCGAATCAGCTTCCACCTGAATATGTTTGTGTGAATGGGAAGCCACTTTCTTATGAGGAGTTGGTTATGTTGCAGAATTGTCCAAATCCTCCAAAGAAGCTAAAGCCAGGAAACTATTGGTATGATAAAGTGTCTGGTCTTTGGGGGAAGGAAGGACAGAAGCCTTCCAGAATTATAAGTCCCCATCTGAATGTTGGAGACCCCATCCAACCGGATGCTAGCAATGGAAACACTCAGGTTTTCATTAATGGTCGAGAAATAACAAAAGTTGAGCTTCGGATGTTGCAGTTGGCTGGAGTGCAGTGTGCCGGCAACCCACATTTTTGGGTCAATGAGGATGGTTCCTACCAAGAAGAGGGGCAGAAGAATACAAGAGGATATATATGGGGAAAGGCTGGAACAAAGCTTGTATGTGCTTTCCTATCCCTGCCAGTTCCTTCTAGATCTTCAAATTCTTTGGGAGAACAACACTCCAATCTGGTTAGCAGAACCATTCCTGACTACCTTGAGCATGGAATAGTTCAGAAGCTTCTCTTAGTTGGTTGCAGTGGATCTGGAACGAGCACTGTTTTTAAACAGGCCAAGATTCTTTACAAAAGTGTCCCATTCTCAGAAGATGAGCATGAAAATATAAAGTTGACCATTCAGAGCAATGTTTATGCATACCTTGGCATACTGCTTGAGGGACGTGAGCGTTTTGAAGATGAAAGTTTGGCTGATTTGAAAAAAGGGCAATCCTCTGTACTTGATACCACAGGAACTAGTCCAAAACTTGATGATAAGACCATATATTCCATTGGCCCAAGATTGAAAGCATTCTCTGATTGGGTGCTGAAAACGATGGTAGCAGGCAAACTTGATGCCATCTTTCCTGCTGCTACACGTGAATATGCACCGTTGATTGAGGAATTGTGGAATGATGCTGCCATTAAGGCCACATATGAAAGAAGAAGTGAATTAGAAATGCTGCCTAGTGTTGCCAATTATTTCTTAGAGCGGGCTGTTAAGATATTAAGGACTGATTATGAACCCTCAGATTTAGATATCCTCTATGCTGAGGGAGTTACATCATCCAATGGGGTGGCTTGTGTGGAGTTTTCATTTCCACAATCAGATTCTGAGGAAGCTGTTGACACTGCTGATCGACATGATTCTTTGGTTAGGTATCAACTAATTAGAGTGCATGCAAGGGGGCTAGGAGAAAATTGCAAGTGGCTGGAGATGTTTGACGATGTTGAAATGGTCATTTTCTGTGTTGCCTTGAGTGACTATGATCAGTTTTCTGTTGATGGAAACGGTTGTCTCGCTAACAAGATGATATTGAGCATGAAGTTTTTTGAAACCATTGTCACTCATCCAACTTTTGAGCAAATGGACTTCCTGTTGATATTAAACAAATTTGATCTGTTTGAGGAGAAAATTGAGCAAGTTCCTCTGACTAAGTGTGAATGGTTCTCTGATTTTCATCCAATAATCAGTCGCAATCGTCCCAACAGCAATAGCAACAGCATAAATAATAATCCCTCCCTTGGTCAGCTGGCTTCCCATTACATAGCAGTTAAATTTAAAAGGCTTTATTCATCTCTTAGAGGACGAAAGTTGTACGTGTCCCTGGTGAAGGGGTTGGAGCCTGATAGTGTTGATGCAGCACTTAAATACGCCAAGGAAATTTTGAAGTGGAACGAAGAGAGACCAAACTTTAGCTTGAGTGAGTACTCAATGTATAGCACTGAGGCGAGTTCATTCTCTCATTGA	2754	0.4506	MSPAAHEYSFAVEYDGPPLTYDLPRALPISVDSIPVAAVVSQVSLSDALALPVVQPLLPSQHHHHAVKELRTHGSEPRVSKELELASERTVSPTSVIAFEHRASQSNVCELSGELSSSGAFEFSNGNDGSGELSDLGDSSRVLEDSSSRELPAEGRTISRTRTESSSTESLDFNELNQQDWPSTESVLSLEYPSTRVSSLKAEDCDGKRPPIVTFNVESDDDLDEEFDVEDTVTRPVKREPLTKGKKGSCYRCFKGNRFTEKEVCLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGFPIDESKRGNLGKCSRMLKRLLNELEVRQIMKAERFCEANQLPPEYVCVNGKPLSYEELVMLQNCPNPPKKLKPGNYWYDKVSGLWGKEGQKPSRIISPHLNVGDPIQPDASNGNTQVFINGREITKVELRMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSRSSNSLGEQHSNLVSRTIPDYLEHGIVQKLLLVGCSGSGTSTVFKQAKILYKSVPFSEDEHENIKLTIQSNVYAYLGILLEGRERFEDESLADLKKGQSSVLDTTGTSPKLDDKTIYSIGPRLKAFSDWVLKTMVAGKLDAIFPAATREYAPLIEELWNDAAIKATYERRSELEMLPSVANYFLERAVKILRTDYEPSDLDILYAEGVTSSNGVACVEFSFPQSDSEEAVDTADRHDSLVRYQLIRVHARGLGENCKWLEMFDDVEMVIFCVALSDYDQFSVDGNGCLANKMILSMKFFETIVTHPTFEQMDFLLILNKFDLFEEKIEQVPLTKCEWFSDFHPIISRNRPNSNSNSINNNPSLGQLASHYIAVKFKRLYSSLRGRKLYVSLVKGLEPDSVDAALKYAKEILKWNEERPNFSLSEYSMYSTEASSFSH*	918

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr7g0952	917	MobiDBLite	consensus disorder prediction	67	85	-	-
	Apr7g0952	917	MobiDBLite	consensus disorder prediction	67	87	-	-
	Apr7g0952	917	MobiDBLite	consensus disorder prediction	122	179	-	-
	Apr7g0952	917	PRINTS	Alpha G protein (transducin) signature	509	524	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr7g0952	917	PRINTS	Alpha G protein (transducin) signature	745	773	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr7g0952	917	PRINTS	Alpha G protein (transducin) signature	793	802	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr7g0952	917	CDD	G-alpha	508	894	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr7g0952	917	Gene3D	-	509	887	IPR027417	-
	Apr7g0952	917	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	508	894	IPR027417	-
	Apr7g0952	917	Gene3D	-	543	688	IPR011025	GO:0007165
	Apr7g0952	917	SMART	galpha_1	492	875	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr7g0952	917	SUPERFAMILY	Transducin (alpha subunit), insertion domain	536	685	IPR011025	GO:0007165
	Apr7g0952	917	MobiDBLite	consensus disorder prediction	158	179	-	-
	Apr7g0952	917	ProSiteProfiles	G-alpha domain profile.	506	908	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr7g0952	917	Pfam	G-protein alpha subunit	508	889	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr7g0952	917	MobiDBLite	consensus disorder prediction	138	157	-	-
	Apr7g0952	917	PANTHER	EXTRA-LARGE GTP-BINDING PROTEIN	8	915	-	-
	Apr7g0952	917	PANTHER	GTP-BINDING PROTEIN ALPHA SUBUNIT	8	915	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr7g0952	Apr-Chr7	16565360	16571189	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr7g0952	-		-	aprc:113868364	1766.51

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr7g0952	7	16565360	16571189	Apr3g0222	3	3982847	3989270	PCT