LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr3g0222	ATGTCACCGGCGAGGACAATGACGGTGGCCGCCGAAGATGACTACGAGGAGGTCGAGTACTCATTTGCCGTGGAGTACAACGGACCGCCACCGTGCTACGATCTTCCCCGTGCGGTGCCGATCAGCGTCGACGTGATTCCGGTGGCGGCGGCGGTCGCGCATGTTCCTTTCTCCGACGCTATGTCTTTGCCGGTTGTGCAACCGCTCTCGGCGCCGGAGCTTCCCGGTGCGAAATTCTCCAAGGATCTCGAAACGCCGATTCCCGAGGTCGCGGTTTCTCCCACTTCGGTGATTGCCTTTGACCGGAGCAACGACGGCGGCGGTTCCGGTAGAACAACGGTGTCTCGGACGTCGGTGATCGTGTTCGAAGACGAGGCTGCGGAAACAAACGAACCGTGTGAGTTGAGCAGAGAAAATTCGTGCGAGTTTTCAGAGCTTTTAGGGAGAAGAAGCTCGAGCGCGTTGTTGAGGAACTCGAACGGCGAGAAAGAGAGTTTGAGTTTGGATTTCAACGATTCGAGCCAACGAGATTGGGCTTCCACGTTGAGTTCAGATTATCCATCGTCTCGTGTTTCTCCATTGAAAAACAAGGAACCTGATCCTGAACCAGAACCTGATGTTAAACATATAGTGACTTTCGAGGTGGATTCGGATGAGGAAGAACGCGAAGTGAAAGAGAGGGTTAAGAGAGAGGGTATGAGGAAAGGGAAAAAAGGGTCGTGCTATCGTTGCTTAAAGGGGAATTGGTTCAATGAGAAGGAAGCATGTCTTGTTTGTGATGCCAAGTATTGTTTGAATTGTGTGTTGAGAGCAATGGGTTCCATGCCGGAAGGTCGCAAATGCGTTGGTTGCATTGGGTATCCAATTGATGAATCTAAGAGGGGGAGTTTGGGGAAATGCTCTCGTATGCTGAAGAGATTGCTTAATCATTTGGAGGTTCGACAAGTAATGAAGGCGGAGAGGTTTTGTGAAGTGAATCAGCTTCCACCTGAGTATGTTTGTGTGAATGGGAACCCTCTTTCTTTTGAGGAACTCTTGGCTTTGCAGAATTGTTCTAACCCTCCGAAGAATCTGAAGCCGGGGAACTATTGGTACGACAAGGTGTCTGGGTTTTGGGGGAAGGAAGGACAAAAGCCTTGTAGGATTATTAGTCCCCATTTGAATGTTGGAGGTCCCATCAAGCCGGACGCTAGCAATGGAAACACGCAGGTTTTCATTAATGGCCGGGAAATAACAAAAGTTGAACTTCGGATGTTGCAGTTGGCGGGAGTTCAGTGTGCTGGTAACCCACATTTTTGGGTCAATGAGGATGGTTCTTATCAAGAAGAAGGACAAAAAAATACAAAAGGGTGTATATGGGGAAAGGCTGGAACGAAGCTTGTGTGTGCTTTGCTGTCCCTGCCCGTTCCTTCTAAATCTTCAAATTCGTGTGGGTTTCTGTCCTCCAATCTGGTTACTAGAACAGTTCCTGAGCACTTCGAACATGGAATAGTTCATAAGCTCCTCTTACTTGGTTATAGTGGGTCTGGAACAAGCACTATTTTTAAGCAGACCAAGATTCTTTACAAAAGCACTCCCTTCTCAGAAGATGAACGGGAAAATATAAAGTTTACCATTCAGACCAATGTCTATGCGTATCTTGGCATACTCCTTGAGGGCCGTGAGCGTTTTGAAGAAGAAAGCCTGGGAAATTTAAAGAAAAGTCAATCTTCTGTGCTTGACACTACAGGAACCAGTCCAAAACTTGGTGACAAGACAATTTATTCCATTGGCACAAGACTGAAAGCATTCTCTGATTGGCTACTGAAAACTATGGTTTTGGGCAAGCTTGATGCCATCTTTCCAGCCGCTACTCGTGAATATGCTCCATTGATTGAGGAGTTATGGAATGATGCAGCCATTAAAGCCACCTATGAAAGAAGAAACGAAATAGAATTGTTACCCAGTGTTGCCAGTTATTTCTTAGAGCGGGCTGTTGAGATATTGAGGACTGATTATGAACCCTCGGATTTAGATATCCTCTATGCTGAAGGAGTTACATCATCCAATGGGATGGCTAGTGTAGAGTTTTCATTTCCTCAATCAGCACCTGAAGAAACTGTTGACACTGCCGACATACATGATTCTTTGGTTAGGTATCAACTAATTACAGTACATGCAAGAGGGCTAGGAGAAAATTGCAAGTGGCTAGAAATGTTTGAGGATGTTGGATTGGTTATTTTGTGTGTTGCCTTGAGCGACTATGATCAGTTTTCAGTTGACGGAAATGGTTGTCTCACAAACAAGATGATATTGAGCAGGAAGTTTTTTGAAGCCATTGTTACTCATCCTACTTTTGAGCATATGGACTTCCTTTTGATATTAAACAAATTAGATGAGTTTGAGAAGAAAATAGAACAAGTTCCACTAACTCAGTGTGACTGGTTCTCTGATTTTCATCCAGTAATTAGCCAACATCGCTGCAGCAGCAGCAACATTAACAGCATTAATAATAACGCCTCTCTTGGTCAGCTGGCTTCCCATTACATAGCAGTTAAGTTTAAGAGGCTTTATTCATCTCTTACAGGGCGAAACTTGCATGTGTCCCTGGTGAAGGGGCTAGAGCCTGATAGTGTTGATGCAGCACTTAAATATGCAAGGGAGATTTTGAAGTGGAGCGAAGAGAGACCAAACTTTAGCTTGAGTGATAATTCGATGTATAGCATTGAGGCGAGTTCATTCTCTCCTTGA	2730	0.4538	MSPARTMTVAAEDDYEEVEYSFAVEYNGPPPCYDLPRAVPISVDVIPVAAAVAHVPFSDAMSLPVVQPLSAPELPGAKFSKDLETPIPEVAVSPTSVIAFDRSNDGGGSGRTTVSRTSVIVFEDEAAETNEPCELSRENSCEFSELLGRRSSSALLRNSNGEKESLSLDFNDSSQRDWASTLSSDYPSSRVSPLKNKEPDPEPEPDVKHIVTFEVDSDEEEREVKERVKREGMRKGKKGSCYRCLKGNWFNEKEACLVCDAKYCLNCVLRAMGSMPEGRKCVGCIGYPIDESKRGSLGKCSRMLKRLLNHLEVRQVMKAERFCEVNQLPPEYVCVNGNPLSFEELLALQNCSNPPKNLKPGNYWYDKVSGFWGKEGQKPCRIISPHLNVGGPIKPDASNGNTQVFINGREITKVELRMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGCIWGKAGTKLVCALLSLPVPSKSSNSCGFLSSNLVTRTVPEHFEHGIVHKLLLLGYSGSGTSTIFKQTKILYKSTPFSEDERENIKFTIQTNVYAYLGILLEGRERFEEESLGNLKKSQSSVLDTTGTSPKLGDKTIYSIGTRLKAFSDWLLKTMVLGKLDAIFPAATREYAPLIEELWNDAAIKATYERRNEIELLPSVASYFLERAVEILRTDYEPSDLDILYAEGVTSSNGMASVEFSFPQSAPEETVDTADIHDSLVRYQLITVHARGLGENCKWLEMFEDVGLVILCVALSDYDQFSVDGNGCLTNKMILSRKFFEAIVTHPTFEHMDFLLILNKLDEFEKKIEQVPLTQCDWFSDFHPVISQHRCSSSNINSINNNASLGQLASHYIAVKFKRLYSSLTGRNLHVSLVKGLEPDSVDAALKYAREILKWSEERPNFSLSDNSMYSIEASSFSP*	910

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr3g0222	909	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	498	884	IPR027417	-
	Apr3g0222	909	SMART	galpha_1	479	864	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr3g0222	909	Gene3D	-	500	862	IPR027417	-
	Apr3g0222	909	PRINTS	Alpha G protein (transducin) signature	500	515	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr3g0222	909	PRINTS	Alpha G protein (transducin) signature	666	688	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr3g0222	909	PRINTS	Alpha G protein (transducin) signature	736	764	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr3g0222	909	PRINTS	Alpha G protein (transducin) signature	784	793	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr3g0222	909	CDD	G-alpha	499	885	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr3g0222	909	PANTHER	EXTRA-LARGE GTP-BINDING PROTEIN	19	907	-	-
	Apr3g0222	909	Pfam	G-protein alpha subunit	499	882	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr3g0222	909	PANTHER	GTP-BINDING PROTEIN ALPHA SUBUNIT	19	907	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Apr3g0222	909	SUPERFAMILY	Transducin (alpha subunit), insertion domain	527	676	IPR011025	GO:0007165
	Apr3g0222	909	MobiDBLite	consensus disorder prediction	179	206	-	-
	Apr3g0222	909	Gene3D	-	534	679	IPR011025	GO:0007165
	Apr3g0222	909	ProSiteProfiles	G-alpha domain profile.	497	900	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr3g0222	Apr-Chr3	3982847	3989270	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr3g0222	-		-	gmx:100818681	1414.82

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr7g0952	7	16565360	16571189	Apr3g0222	3	3982847	3989270	PCT
	Apr2g2356	2	28360742	28361188	Apr3g0222	3	3982847	3989270	PCT