Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0750 ATGGACCTGAGTAGGAGGCTAGGTATTAGGAGTTATGCTCAATTTGGTAAATCCCCTAGATTTCCCAATAGCCAGAATGTTTTGCCTTTATGGAAAGATTTGGAGGATCATGTGGCTCTTTATTCTATTCAGGGTAACTGGGATTGGGTGAAAATTAAGCGATTTCTCCCTAGTCCTATTTGTAATTCTATTGCTCTTATTGAACTGCCCGTTTTATCTAATAATAAGGGCAAGGGACACTATAGCTGTTACAGCCTCAGCGTCAAATTAGATACCTTCCCTCCTCCACAAAAGCAGTTCAAATTAAATAGTGATGGTTCTGTCTTTCAAGCTTTGGAAAAAATAAATGCCAAGAAACTTCTCTTTCAGAACGACGATTACAAAGTTGGAAGTAAAGGATGTACTAATTCTCGGAAAAGAAAAATAGAAGCAACTGGGATTGTGCCCAGTGATAGGTTGTCTTTTCAGTTCCACTCTCCACCCCTCACTCAGCAAACCGGCCTACGTTTATCATTAGACGACGAACAACTACAAAGATTACAATTACAACAATTGCATCAACAAGAACAAAAACTACAGCAATTGCATCATCAACAAAATGGATGTAACTCATTGTCAGAAAGTTTAGCTTTGCAAATCAAGCATCAATTGAGTGAAATAGACCAATTTCTTCTTGTCCAGAGCCAACTATTACGGACGGCATTGGCGGAAAAAAGACAGAGACATTACAGTGAACTGTTAGCGGCGGCAGAGGAATCTGTGGCGCGGAGACTAAGAGAAAAAGAAGCGGAAGTGGAGAAAGCCAAACGATGGAACGCGGAGTTAGAGGCACGCGCGGCTCAACTTAGCGCGGAGGCGCAGGCTTGGCAAGCCAAAGTTAAGGCTCAGGAAGCCACGGCGGCTTCGTTAAAGGCGCAACTGCATAACGCAGCAGAGGAAAGAGGAAAAATGTTATCGTGCGATGCAGATAGACAAGCAGAGGATGCGGAGTCAGCGTATGTTGACCCGGAGCGCTTGGCTATGTTTGGTCCTAGATGCAGAGGTTGTGGGGATAAGATGGCTTCGGTGGTGGTGTTGCCGTGTCGGCACTTATGCATATGCACCCAGTGCGATATGCATTTCAGGGCATGCCCCGTTTGCCTCACCCTTACGAATTCAACCCTTCGAGTCTCTTTATCTTAG 1182 0.445 MDLSRRLGIRSYAQFGKSPRFPNSQNVLPLWKDLEDHVALYSIQGNWDWVKIKRFLPSPICNSIALIELPVLSNNKGKGHYSCYSLSVKLDTFPPPQKQFKLNSDGSVFQALEKINAKKLLFQNDDYKVGSKGCTNSRKRKIEATGIVPSDRLSFQFHSPPLTQQTGLRLSLDDEQLQRLQLQQLHQQEQKLQQLHHQQNGCNSLSESLALQIKHQLSEIDQFLLVQSQLLRTALAEKRQRHYSELLAAAEESVARRLREKEAEVEKAKRWNAELEARAAQLSAEAQAWQAKVKAQEATAASLKAQLHNAAEERGKMLSCDADRQAEDAESAYVDPERLAMFGPRCRGCGDKMASVVVLPCRHLCICTQCDMHFRACPVCLTLTNSTLRVSLS* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0750 393 Coils Coil 258 313 - -
Apr7g0750 393 Pfam Zinc finger, C3HC4 type (RING finger) 345 381 - -
Apr7g0750 393 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 157 392 IPR017066 -
Apr7g0750 393 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 157 392 - -
Apr7g0750 393 ProSiteProfiles Zinc finger RING-type profile. 346 380 IPR001841 -
Apr7g0750 393 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 321 392 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0750 Apr-Chr7 14409649 14416443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0750 346 382 Miscellaneous Gene Families AT2G21380 37.838 4.90e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0750 K19042 - gmx:100797727 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0750 7 14409649 14416443 Apr10g1675 10 29470510 29479025 PCT