Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0744 ATGTACAGAGAGCGAGTCGGCGTCGGATCCAAATCGGAGGTTGCTTCCGTTGATCGGAAGCGAATCAACGACGTTCTCGATAAACAGCTGGAACGATCCTCCCCGTCCACATCCAGAGCCATCAACGGCAAGGATAGGTCCTCCTCTTCCCTCTTATCCGCCAACAAGGATCACAGAGACTCTCGCTCTACCTCTGCTCCTATCTCCAAGAATTCCAACGCTTCTGATGAGGAGTCTGAAACGGATAGTGAAGAGTCTGATGTTAGTGGTTCTGACGGAGATGACACGTCTTGGATCTCGTGGTTCTGCAATTTGAGAGGGAATGAATTCTTTTGCGAGGTTGATGATGATTACATCCAGGATGATTTCAACCTATGCGGATTGAGCAGTCAAGTGCCTTACTATGATTATGCGCTGGATTTAATTTTGGATGTTGAGTCCTCCCACGGTGACATGTTTACTGAGGAACAAAATGAGTTAATTGAATCAGCAGCTGAGATGCTTTATGGTCTAATTCATGCTCGGTACATATTGACAAGCAAAGGAATGGCTGCCATGTTGGACAAGTACAAGAACTATGATTTTGGCAGATGCCCTAGAGTTTATTGCTCTGGACAACCTTGTCTCCCAGTTGGTCAGTCAGACATTCCTAGGTCTAGTACCGTGAAAATATACTGTCCTAGGTGTGAAGACATTTACTATCCCCGGTCCAAGTACCAAGGCAACATTGATGGAGCTTATTTTGGAACTACCTTTCCTCACCTGTTCCTGATGACTTACGGACAACTAAAGCCACCGAAACCATCACAGAGCTATGTTCCAAGAGTTTTTGGCTTCAAACTTCACAAGCCCTGA 855 0.4585 MYRERVGVGSKSEVASVDRKRINDVLDKQLERSSPSTSRAINGKDRSSSSLLSANKDHRDSRSTSAPISKNSNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPPKPSQSYVPRVFGFKLHKP* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0744 284 Pfam Casein kinase II regulatory subunit 97 280 IPR000704 GO:0005956|GO:0019887
Apr7g0744 284 PRINTS Casein kinase II regulatory subunit family signature 97 113 IPR000704 GO:0005956|GO:0019887
Apr7g0744 284 PRINTS Casein kinase II regulatory subunit family signature 114 128 IPR000704 GO:0005956|GO:0019887
Apr7g0744 284 PRINTS Casein kinase II regulatory subunit family signature 169 190 IPR000704 GO:0005956|GO:0019887
Apr7g0744 284 PRINTS Casein kinase II regulatory subunit family signature 194 215 IPR000704 GO:0005956|GO:0019887
Apr7g0744 284 PRINTS Casein kinase II regulatory subunit family signature 216 237 IPR000704 GO:0005956|GO:0019887
Apr7g0744 284 PRINTS Casein kinase II regulatory subunit family signature 244 261 IPR000704 GO:0005956|GO:0019887
Apr7g0744 284 SUPERFAMILY Casein kinase II beta subunit 95 283 IPR035991 GO:0005956|GO:0019887
Apr7g0744 284 PANTHER CASEIN KINASE II SUBUNIT BETA 1 283 IPR000704 GO:0005956|GO:0019887
Apr7g0744 284 SMART CK_II_beta_2 97 280 IPR000704 GO:0005956|GO:0019887
Apr7g0744 284 ProSitePatterns Casein kinase II regulatory subunit signature. 198 229 IPR000704 GO:0005956|GO:0019887
Apr7g0744 284 MobiDBLite consensus disorder prediction 29 50 - -
Apr7g0744 284 MobiDBLite consensus disorder prediction 14 28 - -
Apr7g0744 284 Gene3D - 195 269 - -
Apr7g0744 284 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 90 194 IPR016149 GO:0005956|GO:0019887
Apr7g0744 284 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 283 - -
Apr7g0744 284 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0744 Apr-Chr7 14326563 14329729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0744 K03115 - gmx:100799304 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0744 7 14326563 14329729 Apr7g0744 7 14326563 14329729 ECH
Apr7g0744 7 14326563 14329729 Apr10g1667 10 29383310 29386285 PCT
Apr10g1665 10 29369439 29372120 Apr7g0744 7 14326563 14329729 PCT