Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0683 ATGGCTTCTCCCCTGTTCTTCCTCTGTCTCATGCTCTGCATTTCATACTCATACCAAATGGTTCTAATGCCCCTAACACACACAATATCCAAAACCCAATTCAACAGCATCCACCACCTCCTCAAATCAACCTCCACTCGTTCAGCATCACGCTTCCACCGCCACCGCCAAAACGCAGTCTCTCTCCCGCTCTCTCCGGGAAGTGACTACACACTCTCCTTCAACTTAGGCTCAAACCCTTCGCAACACATAACACTCTACATGGACACGGGAAGCGACATCGTGTGGTTCCCTTGCGCTCCCTTCGAGTGCATCCTCTGCGAAGGAAAACCCAAAGCAACAAAACCCCCAAACATCACGCACTCCAACGCCGTTTCGTGCCAATCCCCTGCATGCGCCGTAGCACACTCTTCCATGTCCCCTCACGACCTCTGCGCAATCGCACGTTGTCCCTTGGACGCAATCGAAACCTCGGATTGTTCTTCTGCCACGTGTCCACCCTTTTACTACGCTTACGCAGATGGAAGCTTCATCGCGCGCCTCTATCGCGATACTCTCTCTATGTCTTCTCTTTTCCTAAAAAACTTCACCTTTGGTTGCGCCCACACCGCACTCGCCGAACCCATTGGCGTAGCAGGTTTCGGTCGGGGCTTATTGTCTCTCCCTGCTCAACTTGCTACCTACTCCCCGCAACTGGGTAACCGGTTTTCCTATTGTTTGGTCTCTCACTCGTTCGACGGAGAACGGGTTCGCAAACCGAGTCCACTCATTATTGGACGCTACGACGGCGCCGGCGAATCGAGTGATTTTATTTACACGTCCATGCTTCGGAACCCAAAGCACCCTTATTTCTACTGCGTGGGACTCGCCGGAATCTCCGTCGGTAACCGGACAATTCCGGCGCCGGAGATGCTGAGGAGGGTGGACGGAAGGGGAAACGGCGGCGTGGTTGTTGATTCCGGGACCACGTTCACGATGTTGCCAACTAGTTTGTATAACTCGGTGGTGGCTGAGTTTGATCACCGAGTGGGGCGAGTTCAGAAGCGCGCGAGTGAGGTTGAAAAGAAAACGGGTCTTGGGCCGTGCTATTATTTGGACGGGTTGGTGAAGGTTCCGGTGGTGACGTTGCATTTTGTTGGTAATAATTCCAATGTGGTGCTGCCAAGGAAGAACTACTTTTACGAGTTTTTGGACGGTGGTGATGGCGCGAGGAGGAAGGGGAAAGTGGGGTGCATGATGCTGATGGACGGTGGTGATGTGGCTGATTTAAGCGGTGGACCCGGGGCCACACTTGGAAATTACCAACAGCAAGGCTTTGAGGTTGTGTATGACTTGGAAAAGCAACGCGTGGGGTTCGCCAGGAGGCAATGCGCGTCGCTTTGGGATAACCTTAACAGCGAGAAAAGCTAG 1410 0.5312 MASPLFFLCLMLCISYSYQMVLMPLTHTISKTQFNSIHHLLKSTSTRSASRFHRHRQNAVSLPLSPGSDYTLSFNLGSNPSQHITLYMDTGSDIVWFPCAPFECILCEGKPKATKPPNITHSNAVSCQSPACAVAHSSMSPHDLCAIARCPLDAIETSDCSSATCPPFYYAYADGSFIARLYRDTLSMSSLFLKNFTFGCAHTALAEPIGVAGFGRGLLSLPAQLATYSPQLGNRFSYCLVSHSFDGERVRKPSPLIIGRYDGAGESSDFIYTSMLRNPKHPYFYCVGLAGISVGNRTIPAPEMLRRVDGRGNGGVVVDSGTTFTMLPTSLYNSVVAEFDHRVGRVQKRASEVEKKTGLGPCYYLDGLVKVPVVTLHFVGNNSNVVLPRKNYFYEFLDGGDGARRKGKVGCMMLMDGGDVADLSGGPGATLGNYQQQGFEVVYDLEKQRVGFARRQCASLWDNLNSEKS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0683 469 Pfam Xylanase inhibitor C-terminal 285 453 IPR032799 -
Apr7g0683 469 PANTHER ASPARTYL PROTEASES 4 466 IPR001461 GO:0004190|GO:0006508
Apr7g0683 469 Gene3D Acid Proteases 56 259 IPR021109 -
Apr7g0683 469 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 4 466 - -
Apr7g0683 469 ProSiteProfiles Peptidase family A1 domain profile. 70 453 IPR033121 -
Apr7g0683 469 SUPERFAMILY Acid proteases 65 462 IPR021109 -
Apr7g0683 469 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 316 327 IPR001969 GO:0004190|GO:0006508
Apr7g0683 469 Pfam Xylanase inhibitor N-terminal 70 246 IPR032861 -
Apr7g0683 469 CDD pepsin_A_like_plant 70 457 IPR034161 -
Apr7g0683 469 Gene3D Acid Proteases 262 463 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0683 Apr-Chr7 13658234 13659686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0683 52 460 Miscellaneous Gene Families AT1G44130 24.485 4.60e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0683 - - gmx:100807884 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0683 7 13658234 13659686 Apr7g0683 7 13658234 13659686 ECH
Apr7g0683 7 13658234 13659686 Apr10g1596 10 28492267 28493712 PCT