Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1596 ATGGCTTCTCCCCTGTTACTGCTGTTGCTCATGCTCATGATCCTCTGTATGTCACATCCATCATGCCAAATGGTGCTTCTGCCACTAACTCACTCTCTTTCCAAAGCCCAATTCAACAGTACCCACCACCTCCTCAAATCCACCTCCACCCGTTCAGCAGCCCGATTCCGGCACCATCGCCAACTCTCGCTCCCACTCTCCCCAGGCAGCGACTACACTCTCTCTTTCAACCTGGGCCCCCAAGCCCAGGCCCAGCCCATTACACTCTACATGGACACAGGCAGCGACCTCGTCTGGTTCCCATGCGCCCCTTTCAAATGCATCCTCTGCGAAGGCAAACCCAGCCTCTCTCTTTCTTCTCCCACCAACATATCCCAAAGTATCGCCGTTTCGTGCAAGTCCTCTGCATGCTCCGCAGCACACAACTCGATCCCTTCCTCCGATCTCTGCGCAATGGCTCGTTGCCCTCTCGAATCCATTGAAACCTCCGATTGCGCTTCTTTCTCGTGTCCACCGTTTTACTATGCCTATGGTGATGGAAGCTTAATAGCTCGTCTTTATCGTGATACACTTTCCCTCTCTTCTCTGTTTCTCAAAAACTTCACATTCGGTTGCGCCCACACCACCCTCGCCGAACCCATTGGAGTCGCCGGCTTCGGTCGCGGCTTGCTCTCTTTCCCGGCCCAGCTTGCTACTCAAGCTCCTCAGCTCGGAAACCGGTTCTCTTATTGCTTGGTTTCTCACTCGTTCGACTCGGAACGAGTTCGCCGACCGAGTCCGCTTATTCTTGGCCGTTATGATGATAAAGAAAAGAAGGATGGTGATGGTGGGGAAATGGTTGAGTTTGCGTACACGCCTATGCTTGAAAACCCGAAGCATCCTTATTTCTACTGTGTTGGACTCGATGGGATTTCCGTGGGAAAAAGAACAATACCGGCGCCGGAAATGCTGAGGAGAGTGAACCGAAGAGGCGACGGCGGCGTGGTGGTGGATTCCGGCACGACGTTCACGATGTTGCCAGCAGGGTTTTACGACTCGGTGGTGGCTGAGTTCGACGGCCGAGTCGGGCGAGAGAACGAGCGGGCGCGTCGAGTTGAGGAGAAAACGGGACTCGCGCCGTGCTATTATTTGAACGCGATGGTGAAAGTGCCGGCGGTGACGCTGCGTTTCGCGGGAGGAAATTCCAGTGTGGTGCTGCCTAGGAAAAACTTTTTTTACGAGTTTTTGGACGGTGGTGATGGAACGAGAAGGAAGCGGAGAGTGGGCTGTTTGATGCTGATGAACGGTGGAGATGAGGCTGAGTTGAGCGGTGGGCCCGGGGCCACTCTTGGGAATTACCAGCAGCAGGGATTTGAAGTTGTGTATGACCTGGAAGAGAAGCGCGTGGGTTTCGCCAGGAGGCAGTGCGCGTCGCTTTGGGATAAACTCAATCGCGACAAAAACTAG 1446 0.5429 MASPLLLLLLMLMILCMSHPSCQMVLLPLTHSLSKAQFNSTHHLLKSTSTRSAARFRHHRQLSLPLSPGSDYTLSFNLGPQAQAQPITLYMDTGSDLVWFPCAPFKCILCEGKPSLSLSSPTNISQSIAVSCKSSACSAAHNSIPSSDLCAMARCPLESIETSDCASFSCPPFYYAYGDGSLIARLYRDTLSLSSLFLKNFTFGCAHTTLAEPIGVAGFGRGLLSFPAQLATQAPQLGNRFSYCLVSHSFDSERVRRPSPLILGRYDDKEKKDGDGGEMVEFAYTPMLENPKHPYFYCVGLDGISVGKRTIPAPEMLRRVNRRGDGGVVVDSGTTFTMLPAGFYDSVVAEFDGRVGRENERARRVEEKTGLAPCYYLNAMVKVPAVTLRFAGGNSSVVLPRKNFFYEFLDGGDGTRRKRRVGCLMLMNGGDEAELSGGPGATLGNYQQQGFEVVYDLEEKRVGFARRQCASLWDKLNRDKN* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1596 481 ProSiteProfiles Peptidase family A1 domain profile. 72 465 IPR033121 -
Apr10g1596 481 Pfam Xylanase inhibitor C-terminal 297 465 IPR032799 -
Apr10g1596 481 Gene3D Acid Proteases 277 474 IPR021109 -
Apr10g1596 481 Gene3D Acid Proteases 61 264 IPR021109 -
Apr10g1596 481 PANTHER BNAA01G17170D PROTEIN 1 474 - -
Apr10g1596 481 Pfam Xylanase inhibitor N-terminal 72 263 IPR032861 -
Apr10g1596 481 SUPERFAMILY Acid proteases 68 474 IPR021109 -
Apr10g1596 481 PANTHER OS07G0603500 PROTEIN-RELATED 1 474 - -
Apr10g1596 481 CDD pepsin_A_like_plant 72 469 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1596 Apr-Chr10 28492267 28493712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1596 - - gmx:100805699 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1596 10 28492267 28493712 Apr10g1596 10 28492267 28493712 ECH
Apr7g0683 7 13658234 13659686 Apr10g1596 10 28492267 28493712 PCT