Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0681 ATGAGCACCGGCGACCTTCTCAACATCGACCCTCTCGAACTTAAGTTCTTCTTTGAGCTGAAGAAGCAGATCTCATGTACTCTTCAATTGTCAAATAAGACCGACAGCTATGTAGCTTTCAAGGTGAAAACGACAAATCCCAAGAAGTATTGTGTTCGTCCAAACACTGGAATTGTCTCGCCACGATCAACGTGTGATGTTATAGTTACGATGCAAGCGCAAAAGGAAGCTCCAGCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGCGTAAAAACACCTGATGGAGCCACCCCAAAGGATATCACTGCAGAAATGTTCAACAAGGAAGCAGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGCTGTATATTCCTCCACCACAGCCTCCATCTCCAGTCCCAGAAGGTTCCGAGGAAGGGTCATCACCTAGAGCTTCTGTTTCCGAAAATGGAAACTTCAATGCTATTTATGTAAACAGATGGCTTACGGAAACAGATATTTATGTGCGTAGTGGCTTTATTTTGATTATGGTGGCTTTGTCACAGGCAAAAGTTCTTATCTCAAGGTTGTCTGAAGAGAAGAATAATGCAATTCTACAAAATAACAAGCTTCGTCAGGAACTGGATCTGCTCAGACGTGAAAGCAACAAAAATCGTGGGGGTGTCTCTATGGTCATTGTCATATTAATTGGCTTACTTGGCATATTTATGGGGTATCTCATGAAGAGGACCTAA 741 0.4278 MSTGDLLNIDPLELKFFFELKKQISCTLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTPDGATPKDITAEMFNKEAGHVVEECKLRVLYIPPPQPPSPVPEGSEEGSSPRASVSENGNFNAIYVNRWLTETDIYVRSGFILIMVALSQAKVLISRLSEEKNNAILQNNKLRQELDLLRRESNKNRGGVSMVIVILIGLLGIFMGYLMKRT* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0681 246 Gene3D Immunoglobulins 2 129 IPR013783 -
Apr7g0681 246 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Apr7g0681 246 SUPERFAMILY PapD-like 2 141 IPR008962 -
Apr7g0681 246 Coils Coil 189 216 - -
Apr7g0681 246 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Apr7g0681 246 PIRSF VAMP_assoc_prot 1 245 IPR016763 GO:0005789
Apr7g0681 246 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 244 - -
Apr7g0681 246 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 244 IPR016763 GO:0005789
Apr7g0681 246 MobiDBLite consensus disorder prediction 127 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0681 Apr-Chr7 13634243 13638152 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0681 - - gmx:100527687 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0681 7 13634243 13638152 Apr7g0681 7 13634243 13638152 ECH
Apr7g0681 7 13634243 13638152 Apr10g1595 10 28475861 28480504 PCT