Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1595 ATGAGCACTGGGGAACTCCTCAACATCGAACCTCTCGAACTCAAGTTCCCCTTTGAGCTGAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCTAATAAGACCGATAGCTATGTAGCTTTCAAGGTGAAAACGACAAATCCCAAGAAGTACTGTGTTCGTCCGAACACTGGAATTGTCTTGCCGCGATCTACATGTGATGTTATGGTTACCATGCAAGCACAAAAAGAAGCTCCATCTGATATGCAATGCAAGGATAAGTTTCTGCTTCAGAGTGTAAAAACTCCTGATGGTGCCAGTCCAAAGGATATCACTGCAGAAATGTTCAACAAGGAGGCAGGGCATGTGGTTGAGGAATTCAAATTGAGAGTAGTGTATGTTTCTCCACCTCAACCACCATCTCCAGTCCCAGAAGGTTCTGAGGAAGGGTCGTCACCTAGAGGTTCTGTTTCAGAAAATGGAAATGCCAATGGTTCTGACTCCACACAAGCTAGAGCTATTATCTCAAGGCTAACTGAAGAAAAGAATAATGCAATTCAACAAAATAACAAACTCCGCCAGGAACTGGAGCTACTGAAGCGTGATGGCAACAAAAGTCGTGGTGGAGTCTCATTTGTCTTTGTCGTATTAATTGGCTTACTTGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 675 0.4326 MSTGELLNIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVMVTMQAQKEAPSDMQCKDKFLLQSVKTPDGASPKDITAEMFNKEAGHVVEEFKLRVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDSTQARAIISRLTEEKNNAIQQNNKLRQELELLKRDGNKSRGGVSFVFVVLIGLLGIIMGYLMKKT* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1595 224 Coils Coil 167 194 - -
Apr10g1595 224 PIRSF VAMP_assoc_prot 1 223 IPR016763 GO:0005789
Apr10g1595 224 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 222 IPR016763 GO:0005789
Apr10g1595 224 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Apr10g1595 224 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 222 - -
Apr10g1595 224 MobiDBLite consensus disorder prediction 127 161 - -
Apr10g1595 224 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Apr10g1595 224 MobiDBLite consensus disorder prediction 143 161 - -
Apr10g1595 224 SUPERFAMILY PapD-like 2 141 IPR008962 -
Apr10g1595 224 Gene3D Immunoglobulins 2 130 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1595 Apr-Chr10 28475861 28480504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1595 - - gmx:100527687 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1595 10 28475861 28480504 Apr10g1595 10 28475861 28480504 ECH
Apr7g0681 7 13634243 13638152 Apr10g1595 10 28475861 28480504 PCT
Apr10g1595 10 28475861 28480504 Apr7g0730 7 14227404 14230608 PCT