Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0679 ATGGCAAAGAGCTACTTCAAACAAGAACATGATCTTGAGAAGAGAAGAGCTGAGGCAGCTAGGATTAGGGAGAAATACCCGGACAGGATCCCGGTAATTGTGGAGAAGGCTGAAAGAAGTGACATCCCAAGTATTGACAAGAAGAAGTACCTTGTCCCTGCTGACTTGACTGTAGGACAGTTTGTCTACGTGATCCGCAAAAGGATTAAATTAAGTGCAGAAAAGGCAATCTTTATATTTGTGGATAACGTCCTTCCTCCTACAGGAGCTATTATGTCTTCCATATATGATGAGAAAATGGATGAGGATGGGTTCCTTTATGTTACATACAGCGGCGAGAACACCTTTGGGGATCTGATTTCATTCATTCAGTAG 375 0.424 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSIYDEKMDEDGFLYVTYSGENTFGDLISFIQ* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0679 124 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Apr7g0679 124 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Apr7g0679 124 CDD Ubl_ATG8 12 114 - -
Apr7g0679 124 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Apr7g0679 124 Gene3D - 1 117 - -
Apr7g0679 124 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0679 Apr-Chr7 13613641 13617351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0679 K08341 - gmx:100499835 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0679 7 13613641 13617351 Apr7g0679 7 13613641 13617351 ECH
Apr7g0679 7 13613641 13617351 Apr10g1590 10 28445649 28448785 PCT