Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1590 ATGGCAAAGAGTTACTTCAAACAAGAGCATGATCTTGAGAAGAGAAGAGCTGAGGCTGCTAGGATTAGAGAGAAATACCCAGATCGTATCCCGGTGATTGTGGAGAAGGCAGAAAGAAGTGATATCCCAAGTATTGACAAGAAGAAGTACCTAGTCCCTGCTGATCTGACTGTTGGACAGTTTGTCTATGTTATTCGCAAAAGGATTAAATTAAGTGCAGAAAAGGCAATCTTTATTTTTGTTGACAACGTCCTTCCACCTACAGGAGCAATTATGTCTTCCATATATGATGAGAAGAAGGATGAAGATGGGTTTCTTTATGTTACTTACAGTGGGGAGAACACCTTTGGGGATCTGACTTCCCACTAG 369 0.4119 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSSIYDEKKDEDGFLYVTYSGENTFGDLTSH* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1590 122 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Apr10g1590 122 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Apr10g1590 122 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Apr10g1590 122 CDD Ubl_ATG8 12 114 - -
Apr10g1590 122 Gene3D - 1 117 - -
Apr10g1590 122 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1590 Apr-Chr10 28445649 28448785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1590 K08341 - gmx:100499835 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1590 10 28445649 28448785 Apr10g1590 10 28445649 28448785 ECH
Apr7g0679 7 13613641 13617351 Apr10g1590 10 28445649 28448785 PCT