Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0676 ATGCGAGTGAAAGAGATGCACCCGCTGTGCTGTATCTCCCTGGAGAGTCCCGGAATCGGCAACCATTCTCCGGACCGGGAGGCGCCGTCACTTTTCCGAACCAGGAGCCTCCCGGCTGCCGGATCTCACGGCAATGCTGCTCAGGGATCGGAGGTAACCGTCGCCGGCGTTCTATACAAGTGGACCAATTACGGCAAAGGCTGGAGATCCCGATGGTTCCTCTTGCGAAATGGCATTCTCTCTTACGCCAAGATCCGCTGTCCGGAGAATCTCAACCTCCTCATTCCTTCCTACGACGTTCGCCTCATCGGAGAGATTTCCACCAACCGCCTCTCACGGATGGACAGTGCCACCTCCGTCACGCGACGGAAGTATCGCAAAGCTTCTTCTTCTTCTGGCGTAGTTCATCTCAAGATTTCGTCGTTTAGAGAGAGCAAATCAGATGATCGGCGTTTCTATATATTTACAGCAACGAAGACTCTCCATCTGAGAACTGATTCGAGGAAAGATCGCGTGGCGTGGATGCAAGCCTTAGTGTCAACTCGTGGCTTGTATCCTCTTCAACCACTCAATGATCATTTCTTACTTGCACACAATGATATATCCGTGTCCACCGAGCGGCTTAAGACACGCTTGCTTGAAGAGGGTACGGGTGAAAACCTTGTAAAGGAGTGCGAGCAAATCATGCTCTCAGAGTTCTCCGAAATACGAGGACAACTTGAAGTTCTTTGTCAAGAGCGATCTAATTTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAATACTGAACCTGAGGCCTCTGCAATACATGATGGTGGATACCAATTAACAAAGAATGAGCTTTCAAGTCTTGGACGTGGAAAATATAGTGAATGTAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGACGGAGGAAGAGTCAGATGAAGATGAAAGCTCATATTATGATACTAGAGAGTGTTTTACAGAGGCTGATTGCAAGTGTGAGTCAAGAGGATCTATGAATCAACACCCTCAGATTGGAAGACGAAAAAAGCTTCCAAATCCTGTTGAGAGAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAGGACAACGTGGGAAAAGATCTCACAAGAGTTTGTCTTCCAGTATACTTTAATGAGCCGATATCATCGCTTCAAAAATGTTGTGAGGACTTGGAATACTCTTATCTTCTGGATCAAGCTTATGAGTACGGAAAATCAGGAAACAGTCTCCTTAGGGCATTGAATGTCGCTGCCTTTGCAATTTCTGGATATGGATCATCTGAAGGTCGTCATTGTAAACCCTTTAATCCTTTATTAGGAGAAACCTTTGAAGCTGATTATCCTGAGAAAGGAATTCGCTTCTTTTCAGAGAAGGTCAGTCATCATCCAACTCTCATTGCCTGCCATTGCGAAGGTAGGGGATGGAAGTTTTGGGCTGACAGCAACATCCATTCAAAGTTTTGGGGAACGTCAATTCAGCTTGATCCAGTGGGTGTTCTGACCCTAGAGTTCGATGATGGTGAAATATTTCAGTGGAGCAAGGTCACAACCACAATCTATAATCTTATCCTTGGGAAAATATACTGTGATCATCATGGGAACATGGATATACGTGGTAATCGTAAATATTCCTGCAAACTCAAGTTCAAAGAGCAGACTATTCTTGACCGAAATCCTCACCAAGTGCATGGATTTGTCGAAGATGTAATGGGAAAAAAAATTGCCACGTTATTTGGCAAATGGGACGACCGCATGTATTATGTTAGTGGTGATGTGAATGTCAAGCCAAAAGATTTCACTTCATCAAACGCATCCTTGTTGTGGAAAAGGAATATGCCACCGCCTAATCTCACCCGGTATAATTTGACACCATTTGCCATCACTCTGAATGAGCTTACTCCGGGACTGAAGGAGAAGCTCCCGCCCACGGATTCCAGGCTAAGACCAGATCAGCGGCATCTAGAGAATGGGGAATACGAGAAGGCTAATTTGGAGAAACAACGGTTGGAAAAACGGCAGAGAATGTCACGGAAAATGCAAGAAAATGGTTGGAAGCCTAGGTGGTTCCGAAGAGAAGGTGAGAAGGAAGCATTTCGATACGTTGGTGGGTATTGGGAAGCAAGAGAGCTTGGACGATGGGATGGGTGTCCAAATATATTTGGCAAATTTAATGAAGACTCTGGCGATCCATTAGGTGCATCTTAA 2220 0.4532 MRVKEMHPLCCISLESPGIGNHSPDREAPSLFRTRSLPAAGSHGNAAQGSEVTVAGVLYKWTNYGKGWRSRWFLLRNGILSYAKIRCPENLNLLIPSYDVRLIGEISTNRLSRMDSATSVTRRKYRKASSSSGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWMQALVSTRGLYPLQPLNDHFLLAHNDISVSTERLKTRLLEEGTGENLVKECEQIMLSEFSEIRGQLEVLCQERSNLLDTIRQLEAANTEPEASAIHDGGYQLTKNELSSLGRGKYSECSTTESSDDIEKQETEEESDEDESSYYDTRECFTEADCKCESRGSMNQHPQIGRRKKLPNPVEREKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSYLLDQAYEYGKSGNSLLRALNVAAFAISGYGSSEGRHCKPFNPLLGETFEADYPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNIHSKFWGTSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRKYSCKLKFKEQTILDRNPHQVHGFVEDVMGKKIATLFGKWDDRMYYVSGDVNVKPKDFTSSNASLLWKRNMPPPNLTRYNLTPFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANLEKQRLEKRQRMSRKMQENGWKPRWFRREGEKEAFRYVGGYWEARELGRWDGCPNIFGKFNEDSGDPLGAS* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0676 739 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 730 - -
Apr7g0676 739 MobiDBLite consensus disorder prediction 642 662 - -
Apr7g0676 739 Gene3D - 446 618 - -
Apr7g0676 739 Gene3D - 656 713 - -
Apr7g0676 739 Gene3D - 47 182 IPR011993 -
Apr7g0676 739 SUPERFAMILY PH domain-like 49 180 - -
Apr7g0676 739 Coils Coil 240 260 - -
Apr7g0676 739 SMART PH_update 52 185 IPR001849 -
Apr7g0676 739 Coils Coil 657 686 - -
Apr7g0676 739 Pfam Oxysterol-binding protein 360 714 IPR000648 GO:0008289
Apr7g0676 739 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 730 IPR000648 GO:0008289
Apr7g0676 739 MobiDBLite consensus disorder prediction 301 316 - -
Apr7g0676 739 SUPERFAMILY Oxysterol-binding protein-like 355 727 IPR037239 -
Apr7g0676 739 ProSiteProfiles PH domain profile. 51 183 IPR001849 -
Apr7g0676 739 Pfam Pleckstrin homology domain 56 178 - -
Apr7g0676 739 MobiDBLite consensus disorder prediction 286 318 - -
Apr7g0676 739 MobiDBLite consensus disorder prediction 646 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0676 Apr-Chr7 13569422 13579996 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0676 K20456 - gmx:100819924 1367.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0676 7 13569422 13579996 Apr7g0676 7 13569422 13579996 ECH
Apr7g0676 7 13569422 13579996 Apr10g1580 10 28338388 28348140 PCT