Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0632 ATGGAGGATTCAACCACTCCGTCTTCGAAGCACAACATCGACCATGTCCACCGCATCATCAACTCGAATCGATACAAGTCGCCTTCTAGAACAATCTGCTCGGACAGGTTCATACCCACCAGATCCGATTCCAATTTCGCTCTCATCAATTTATCGCCTTCAGAGGACACTTCCAAAGCTTACAACACCCTTTTGCGTACTGCTTTGTTTGGACCCGATGCTCCCGTTACTCCCAATAAACGGACCCCTAATATTTTCCGTTACAAAACGGAGACTCGACGCTCCATGCACTCTCTCTCCCCTTTCACGTTCCATGATGACCCGTTACCTGGTTGTGCCCCTCATCATACTCCTCTCAAGCCTCCTCGCAGGGTTCCTCTGTCACCTTTCAAGGTTCTGGATGCACCTGCACTGCAAGATGATTTTTATCTGAATCTTGTGGACTGGTCCTTCAACAATGTCTTGGCTGTGGCTCTGGGAAACTCTGTTTATTTGTGGAATGCTAGTAGCAGCAAGGTAACTAAATTATGCGAGCTGGGGATGGACGATTGTGTTTGCTCGGTTAGCTGGGCTCAACGTGGTACCTACCTGGCTGTTGGAACTAACAGTGGTAAAGTGCAGATTTGGGATGCGTCTCAATGCAAGACAATAAGAACCATGGAGGGTCATCGTTTACGAGTTGGAACCTTGGCCTGGAGTTCATCTCTTTTGTCTTCTGGTAGCCGGGATAAAATCATTTATCAACGAGATATACGTGCACAGGAGGATTTTGTCAGTAAACTGTCTGGGCACAAGTCAGAGGTTTGTGGATTGAAGTGGTCTTATGATAACCGGGAGTTAGCATCCGGAGGAAATGACAACAGGTTGCTTGTTTGGAATCAACACTCAACCCAGCCCATCCTGAAGTACTGTGAGCATACAGCAGCTGTTAAAGCTATTGCATGGTCTCCTCATGTTCATGGACTTCTTGCATCAGGAGGAGGCACTGCAGACAGATGTATTCGTTTTTGGAATACAACCACAAACTCACAGTTAAACTGTATTGACACTGGAAGTCAGGTTTGTAATCTTGTTTGGTCTAAAAATGTCAATGAAATGGTCAGCACACATGGCTACTCCCAGAACCAGATAATAGTTTGGAGATACCCCACAATGTCAAAGCTAGCAACTCTTACAGGCCACACTTATCGAGTTCTTTATCTTGCTCTCTCTCCTGATGGGCAGACTATCGTCACTGGAGCTGGAGATGAAACTCTTAGATTTTGGAATGTATTCCCTTCCCGTAAATCACAGAATACTGATAGTGAAATTGGAGCTTCATCTTTTGGAAGAACTATTATCAGATGA 1347 0.4551 MEDSTTPSSKHNIDHVHRIINSNRYKSPSRTICSDRFIPTRSDSNFALINLSPSEDTSKAYNTLLRTALFGPDAPVTPNKRTPNIFRYKTETRRSMHSLSPFTFHDDPLPGCAPHHTPLKPPRRVPLSPFKVLDAPALQDDFYLNLVDWSFNNVLAVALGNSVYLWNASSSKVTKLCELGMDDCVCSVSWAQRGTYLAVGTNSGKVQIWDASQCKTIRTMEGHRLRVGTLAWSSSLLSSGSRDKIIYQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLLVWNQHSTQPILKYCEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNSQLNCIDTGSQVCNLVWSKNVNEMVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLALSPDGQTIVTGAGDETLRFWNVFPSRKSQNTDSEIGASSFGRTIIR* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0632 448 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 261 293 - -
Apr7g0632 448 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 391 424 - -
Apr7g0632 448 ProSiteProfiles Trp-Asp (WD) repeats profile. 261 302 IPR001680 GO:0005515
Apr7g0632 448 SMART WD40_4 254 293 IPR001680 GO:0005515
Apr7g0632 448 SMART WD40_4 213 250 IPR001680 GO:0005515
Apr7g0632 448 SMART WD40_4 170 210 IPR001680 GO:0005515
Apr7g0632 448 SMART WD40_4 296 338 IPR001680 GO:0005515
Apr7g0632 448 SMART WD40_4 384 423 IPR001680 GO:0005515
Apr7g0632 448 SMART WD40_4 126 167 IPR001680 GO:0005515
Apr7g0632 448 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 12 448 IPR033010 GO:0010997|GO:0097027|GO:1904668
Apr7g0632 448 Pfam Anaphase-promoting complex subunit 4 WD40 domain 161 234 IPR024977 -
Apr7g0632 448 ProSiteProfiles Trp-Asp (WD) repeats profile. 391 432 IPR001680 GO:0005515
Apr7g0632 448 PANTHER PROTEIN FIZZY-RELATED 1 12 448 - -
Apr7g0632 448 ProSiteProfiles Trp-Asp (WD) repeats profile. 178 219 IPR001680 GO:0005515
Apr7g0632 448 Gene3D - 120 427 IPR015943 GO:0005515
Apr7g0632 448 ProSitePatterns Trp-Asp (WD) repeats signature. 410 424 IPR019775 -
Apr7g0632 448 SUPERFAMILY WD40 repeat-like 131 432 IPR036322 GO:0005515
Apr7g0632 448 Pfam WD domain, G-beta repeat 387 423 IPR001680 GO:0005515
Apr7g0632 448 Pfam WD domain, G-beta repeat 299 338 IPR001680 GO:0005515
Apr7g0632 448 Pfam WD domain, G-beta repeat 258 293 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0632 Apr-Chr7 13012791 13018168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0632 197 428 Miscellaneous Gene Families AT5G08390 21.702 1.14e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0632 K03364 - gmx:100780928 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0632 7 13012791 13018168 Apr7g0632 7 13012791 13018168 ECH
Apr10g1526 10 27714875 27721373 Apr7g0632 7 13012791 13018168 PCT