Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0605 ATGGCATCGCAAGGAAGATATAAGAGGCATCAAGAGAAGTCTCAAACAAGCATCTCTAACAATGGAAGAAATTCAGTTCCTGCCAAATTCTCAAACGATACGGAGAGGCTTCAACATATTAACAGCATACGCAAAGCCCCCGTAGGGGCTCAGATGAAGCGTGTTATTGATCTACTATTCGAGACCCGACAGGCCTTCACAATAGAGCAAATAAATGAGGCATGCTATGTGGACATGAAAGCTAACAAAGATGTTTTCGAGAGTATGAGGAAAAACCCGAAAGTAAAGTTTGATGGGGAACGGTTTTCTTACAAGTCAAAACACGACGTTAGGGACAGAAGTCAGCTGCTTTACCTCATACGTAAGTTTCCAGAGGGCATTGCTGTTGTTGACCTAAAGGATGCTTACCCAACTGTGATTGAGGACTTGCAGGCTTTGAAAGTTGCACGGGAGATTTGGCTTCTGTCCAACTTTGATTCACAGGAGGAGATTGCATATCCTAATGACCCTAAAGTGCCGATGAAGGTGGATGATGACCTAAAACTGCTTTTCCGGGGGATTGAGTTGCCTCAAGATATGCTTGATATAGAAAAGGATCTACAAAAAAATGGAATGAAGCCTGCTACTAACACTGCAAAAAGGAGGAGTGCAGCGCAAATGGAAGGAGTTTCATCCAAGCCTAAACCTAAGAAGAAGAAGAATGAAATCACCAAGAGAACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTCCAGAACTTAAACAATTCCTGA 774 0.4302 MASQGRYKRHQEKSQTSISNNGRNSVPAKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQAFTIEQINEACYVDMKANKDVFESMRKNPKVKFDGERFSYKSKHDVRDRSQLLYLIRKFPEGIAVVDLKDAYPTVIEDLQALKVAREIWLLSNFDSQEEIAYPNDPKVPMKVDDDLKLLFRGIELPQDMLDIEKDLQKNGMKPATNTAKRRSAAQMEGVSSKPKPKKKKNEITKRTKLTNAHLPELFQNLNNS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0605 257 MobiDBLite consensus disorder prediction 202 257 - -
Apr7g0605 257 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 36 111 IPR003166 GO:0006367
Apr7g0605 257 MobiDBLite consensus disorder prediction 204 218 - -
Apr7g0605 257 Pfam TFA2 Winged helix domain 2 111 168 IPR040501 -
Apr7g0605 257 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 23 256 IPR016656 GO:0005673|GO:0006367
Apr7g0605 257 PANTHER BNAA02G21830D PROTEIN 23 256 - -
Apr7g0605 257 MobiDBLite consensus disorder prediction 1 33 - -
Apr7g0605 257 MobiDBLite consensus disorder prediction 14 33 - -
Apr7g0605 257 Pfam TFIIE beta subunit core domain 50 110 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0605 Apr-Chr7 12634204 12636426 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0605 K03137 - gmx:100788089 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0605 7 12634204 12636426 Apr7g0605 7 12634204 12636426 ECH
Apr7g0605 7 12634204 12636426 Apr2g1173 2 17983825 17986693 PCT