Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1173 ATGGCGTTGCAAGAAAGGCTACAGAAGTTCAAGAAGCAGCAAGAGAAGTGCCAAACGACACTTTCGAGCATTGCAGCTAGCAAAGCCGCTAGTCAAAAAGCTGTTTCCCATGGTATCGCTTCGGTCAATGGAAGAAACGCAGCCCCTGCAGTCAAGTTCTCTAACGACACAGAGAGGCTTCAACATATTAACAGCATTCGCAAAGCCCCTGTGGGTGCTCAGATGAAGCGTGTTATTGATCTCCTTCTAGAGATACGGCAAGCTTTAACGCCAGAGCAGATAAATGAAGCGTGCTATGTTGACATGAAGGCTAACAAAGATGTTTTTGATAATTTGAGGAAAAATCCTAAAGTACACTATGATGGGCAACGATTCTCTTATAAGTCAAAGTATGGTCTTAAAGACAGAACTGAGCTTCTTCAACTGATACGTAAGTATCCGGAGGGCATTGCTGTTATTGACCTAAAGGATGCTTACCCCACTGTGATGGAAGACCTGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTCTCCAACTTTGATTCACAGGAAGACATTGCTTACCCTAATGATCCCAAAGTGCACATTAAGGTGGATGATGATCTAAAACAGCTTTTTCGGAGTATTGAATTGCCTCGTGATATGATTGATATAGAGAAGGATCTTCAAAAGAATGGCATGAAGCCCGCGACTAACACTGCTAAGAGGAGGAGTGCAGCACAAATTCAAGGCATTTCCTCCAAGCCCAAGCCTAAGAAGAAGAAGAGTGAAATCAGCAAGAGAACCAAGCTGACCAATGCTCATCTTCCTGAGCTTTTTCAGAACTTAAACAATTCCTGA 843 0.4377 MALQERLQKFKKQQEKCQTTLSSIAASKAASQKAVSHGIASVNGRNAAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLEIRQALTPEQINEACYVDMKANKDVFDNLRKNPKVHYDGQRFSYKSKYGLKDRTELLQLIRKYPEGIAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGISSKPKPKKKKSEISKRTKLTNAHLPELFQNLNNS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1173 280 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 59 134 IPR003166 GO:0006367
Apr2g1173 280 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 279 IPR016656 GO:0005673|GO:0006367
Apr2g1173 280 MobiDBLite consensus disorder prediction 225 280 - -
Apr2g1173 280 PANTHER BNAA02G21830D PROTEIN 1 279 - -
Apr2g1173 280 Pfam TFA2 Winged helix domain 2 134 191 IPR040501 -
Apr2g1173 280 MobiDBLite consensus disorder prediction 227 246 - -
Apr2g1173 280 Pfam TFIIE beta subunit core domain 73 131 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1173 Apr-Chr2 17983825 17986693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1173 K03137 - gmx:100802433 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1173 2 17983825 17986693 Apr2g1173 2 17983825 17986693 ECH
Apr7g0605 7 12634204 12636426 Apr2g1173 2 17983825 17986693 PCT