Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0455 ATGGCGTCAAAGTCGCTTAGGGGAAGCAGATCATCTCTATCAGCAATGTCTGATGCAAATGAAGGCCCGAAACCACCTTTACCTCCGACTGTAACATTTGGCCGGAGAACTTCCTCAGGTCGCTATGTCAGTTACTCTAGAGATGATCTTGACAGTGAGCTAGGGAGTAGTGGCTTCATGAATTATACTGTGCATTTACCACCAACTCCTGATAACCAACCTATGGATCCATCAATCTCACAGAAAGTTGAGGAGCAGTATGTGTCGAATTCACTCTTTACAGGTGGGTTCAACAGTGTTACTCGAGCCCATCTAATGGATAAGGTTATTGAATCTGAAGCAAGTCATCCGCAGATGGCTGGTGCAAAAGGATCTTCATGTGCAATACCTGGTTGTGATTCTAAGGTGATGAGCGATGAACGTGGTGTTGATATTCTTCCATGTGAGTGTGATTTTAAGATATGTAGAGATTGTTATATAGATGCTGTAAAAACAGGAGGCAGAATATGCCCTGGATGCAAGGAGCCATATAAGAACACAGAACTAGATGAAGTGGCTGTGGACAATGGACGTCCGCTTCCACTTCCTCCACCAAGTGGAATGTCTAAAATGGAGAGGAGGTTGTCCTTGATGAAGTCAACCAAGTCAGCATTGATGAGAAGCCAAACTGGAGACTTTGATCATAATAGGTGGCTCTTTGAAACAAAGGGAACCTATGGCTATGGCAATGCTATATGGCCAAAGGAAGGAGGTTTTGGTAATGAAAAAGAGGATGATGCTGTTGAGCCAACTGAATTGATGAACAGACCCTGGAGACCACTTACAAGGAAACTAAAGATACCTGCTGCTGTTTTGAGCCCATATCGACTTATCATTTTTGTTCGTTTGGTTGTCTTGGCACTGTTCCTGACATGGAGGATCAAGCATCAAAATACTGATGCAGTCTGGCTATGGGGAATGTCTGTTGTTTGTGAAATATGGTTTGCTTTTTCCTGGCTGCTGGATCAATTGCCCAAACTATGCCCAGTAAATCGTTCCACAGATCTTAATGTTCTGAAGGAGAAATTTGAAACACTAACTCCTAACAATCCAACTGGAAAGTCTGATCTTCCAGGCATAGATGTCTTTGTTTCTACAGCTGATCCTGAAAAAGAACCACCTCTTGTCACTGCAAACACCATCTTGTCTATTTTAGCTGCTGATTACCCTGTTGAGAAGCTTTCTTGCTATGTTTCTGATGATGGAGGTGCACTTCTAACTTTTGAGGCAATGGCTGAAGCAGCCAGCTTTGCTAATGTATGGGTTCCTTTCTGCCATAAACATGATATAGAACCCAGGAATCCTGAATCGTACTTCAACCTGAAAAGAGATCCTTACAAAAACAAAGTGCGGTCAGATTTTGTCAAGGATCGTAGACGGGTGAAGCGTGAGTATGACGAGTTCAAGGTTAGGATCAATAGTCTGCCTGATTCTATCCGGCGCCGGTCAGATGCCTATCATGCAAGGGAGGAAATCAAGGCCATGAAAGCTCAGAGACAAAACAGGGAAGATGAACCTTTAGAAGTTGTAAAGATTCCAAAAGCAACATGGATGGCTGATGGGACTCATTGGCCAGGAACTTGGTTGAGTCCTGCATCTGAGCACTCTAAGGGTGATCATGTTGGTATAATTCAGGTGATGTTGAAACCTCCCAGTGATGAACCTCTTCTTGGAAGTGCTGATGATACAAAGCTCATTGACCTGACTGATGTTGATATTCGTCTTCCACTTCTTGTTTATGTTTCTCGAGAGAAGCGTCCTGGCTATGATCACAACAAAAAGGCAGGAGCCATGAATGCCTTGGTTAGAGCATCAGCTATAATGTCAAATGGTCCTTTTATACTCAATCTTGACTGTGACCACTATATCTATAACTCAAAAGCAATGAGAGAAGGCATGTGCTTCATGATGGATCGTGGAGGTGACCGCATTTGCTATGTTCAGTTCCCACAGAGGTTTGAAGGGATTGATCCCTCTGATAGATATGCTAATCATAACACTGTCTTCTTTGATGTCAATATGCGAGCCCTTGATGGACTTCAAGGGCCAGTCTATGTGGGAACTGGTTGCCTTTTTAGACGGGTTGCACTTTATGGTTTTGACCCACCCCGTGCCAAAGAACACCATTCAGGTTGCTGTACTTGTTGTTTTGGTCGTCAGAAAAAGCATGCATCAATGACAAGCACCCCAGAAGAGAATCGTGCACTGAGGATGGGTGATTCTGATGATGAAGAAATGAATCTATCATTGTTCCCTAAGAAGTTTGGAAACTCAACCTTCCTCATTGACTCAATCCCAGTGGCAGAGTTTCAAGGCCGTCCACTAGCTGATCACCCTGCTGTGAAAAACGGGCGTCCACCTGGTGCTCTCACCATACCCCGTGATCTTCTTGATGCATCAACTGTAGCAGAGGCCATCAGTGTCATCTCCTGTTGGTACGAGGACAAGACTGAATGGGGGCAGCGTGTCGGGTGGATCTATGGCTCTGTGACAGAGGATGTGGTCACTGGGTATAGGATGCACAATAGGGGATGGAAATCCATTTACTGTGTGACCAAGCGTGACGCCTTCCGTGGAACTGCTCCCATCAATCTCACTGACAGGCTGCATCAGGTCCTTAGATGGGCTACTGGCTCAGTTGAAATATTCTTCTCTCGCAACAACGCCCTCCTGGCTAGCCCAAGGATGAAAATTCTTCAAAGAATTGCATACCTTAATGTTGGAATTTACCCATTCACATCTATATTTTTAATTGTGTACTGCTTCCTTCCTGCACTATCCCTCTTCTCTGGCCAATTCATTGTTCAAACCCTCAGTGTCACGTTTCTGACCTATCTATTGGGCATTACTGTGACTTTGTGCATGCTTGCAGTCCTTGAAATTAAGTGGTCTGGCATTGAGTTGGAAGAATGGTGGAGAAATGAGCAATTTTGGTTGATTGGAGGGACCAGTGCCCATTTGGCTGCTGTGCTTCAGGGTTTGCTCAAAGTCATAGCAGGGATTGAAATCTCATTCACTTTGACTTCGAAATCCGGTGGTGATGATGTAGACGATGAATTTGCAGATCTCTATATTGTGAAATGGACATCCCTCATGATACCACCCATCACAATTATGATGGTAAACTTAATAGCAATTGCTGTTGGAGTTAGCAGAACCATATACAGTGTGATACCACAGTGGAGCCGTTTACTAGGTGGTGTTTTCTTCAGTTTTTGGGTATTGGCTCATCTCTATCCTTTTGCAAAAGGTTTGATGGGAAGAAGAGGGAGGACACCAACCATAGTCTTTGTATGGTCTGGCCTCATAGCAATAACAATTTCTCTCCTTTGGGTGGCTATCAATCCCCCTGCTGGTTCTAACCAGATTGGGGGTTCATTCCAGTTCCCATGA 3432 0.4429 MASKSLRGSRSSLSAMSDANEGPKPPLPPTVTFGRRTSSGRYVSYSRDDLDSELGSSGFMNYTVHLPPTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTRAHLMDKVIESEASHPQMAGAKGSSCAIPGCDSKVMSDERGVDILPCECDFKICRDCYIDAVKTGGRICPGCKEPYKNTELDEVAVDNGRPLPLPPPSGMSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETKGTYGYGNAIWPKEGGFGNEKEDDAVEPTELMNRPWRPLTRKLKIPAAVLSPYRLIIFVRLVVLALFLTWRIKHQNTDAVWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFETLTPNNPTGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFCHKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYDEFKVRINSLPDSIRRRSDAYHAREEIKAMKAQRQNREDEPLEVVKIPKATWMADGTHWPGTWLSPASEHSKGDHVGIIQVMLKPPSDEPLLGSADDTKLIDLTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRAKEHHSGCCTCCFGRQKKHASMTSTPEENRALRMGDSDDEEMNLSLFPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLSVTFLTYLLGITVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSVIPQWSRLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGSNQIGGSFQFP* 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0455 1143 SUPERFAMILY RING/U-box 112 181 - -
Apr7g0455 1143 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 34 1141 - -
Apr7g0455 1143 SUPERFAMILY Nucleotide-diphospho-sugar transferases 388 714 IPR029044 -
Apr7g0455 1143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 191 IPR013083 -
Apr7g0455 1143 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 580 715 IPR029044 -
Apr7g0455 1143 MobiDBLite consensus disorder prediction 1 38 - -
Apr7g0455 1143 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 34 1141 - -
Apr7g0455 1143 Pfam RING/Ubox like zinc-binding domain 129 178 - -
Apr7g0455 1143 MobiDBLite consensus disorder prediction 1 18 - -
Apr7g0455 1143 Pfam Cellulose synthase 373 1133 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0455 Apr-Chr7 10873474 10879079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0455 1 1143 Glycosyltransferase AT3G03050 84.535 0.0 2036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0455 K20924 - gmx:100792604 2266.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0537 5 7314772 7318783 Apr7g0455 7 10873474 10879079 ECH
Apr7g0455 7 10873474 10879079 Apr7g0455 7 10873474 10879079 ECH