Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0270 ATGGTCGATGGTCACTCTGCTTCATCTAGTGTTGAAATCTGGTGGATCTGGGCCAATTTTGAATCATGCATGATTGGTCCTTTACGTGTTGGCCCCATTTGGAACTCCATGTATCTATCTGGTGTATACGAATACGATCTTGCCGGCACCCTTTCTCTAGTTTTTATCATATCAGATATTATTGATGGATTATCTTATGAGCTTATCTGCTACCTACTTATGGAAATGTTTCAATTTCCATTTAATATAAAGTTTTCCGTTGCTATCTCAATGGGGGTTGGTGAGAAGGAAACTAAAAATCCCAGTTGTTAATTTGTGTTGCAGCCTGTTGGAAACTCATCAGATGGGTTAAAAGCTAGTGATGTAGATCCACGTCTGATTTTTCACCAAGGGATACCATCTGGAGGTGCTAAGTTTGCCTATGACAATATTCAGAAGTTACTGGCTCTTTCTACCAAAGATGGGAGGATTAAACTATTTGGGAAAGATAATGCCCAAGTCCTACTTGAATCCAGTGAACGGGTTCCTAGCAAGTTTTTGCAGTTCATTCAAAACCGGGGCATCCTTATAAATGTCACTTTCAATAACCATATTGAGGTTTGGGACATGGACAAAAAATTGTTGTCTGATATGTACATTGTTAAAGAAGAAATCACTTGTTTTTCAGTCATTCGACATAGCCTCTATATGTATGTTGGATTTTCAAATGGTAATATTTCAGTATTGAAGCTTGATCAAGAACCATGGCATGTGATACGGATGAAATACACTATACCCTTCTCAGCTTCTTATGGAAATTCAACTGAAGAATCTGATGATACTGTTGTAACACACATATTGCCTCAACCAGCAGCCGAAAGTAAGAGAGTTCTCATAATCTTTAGAAATGGCTTAATAATATTATGGGATATTCGAGAAAGCAAATCCATTGTCAGAACTGGCGGAAAAATATCACAGCCACTGTTTAATGAAACAAAGAAAGTGTCTTCTGCATGTTGGGTGTGTCCTTTGGGAAGTAAGGTGGTTGTAGGGTACAACAATGGAGAACTCTTCATTTGGAGCATCCCTTCTCTAAACACAGGAAATGGTTTAGTATCTAATTATAGTAATCAAAGCACTCCCAGGTTCAAATTTAACTTAGGATATAAATCAGACAAAAGTTCCATTGCTTCAGTAAAATGGATTTATGCTGAAGGAAAGGCTAGTCGACTCTATGTCATGGGAGTTTCTGACAATGCTCCTTCAAACTTGTTGCAGGTAGTGTTATTGAATGAACATACAGAATCTCGCACAATTAAGTTGGGACTTCATATGTCTGAAGCCTGTGTTGACATGGAGATCATATCAACCTCAAGTGAACAAAGCAAGCATAGACAAAATTATTTCCTTCTGCTAGGGAAATCAGGTCATGTATATCTTTATGATGACAGATTGATTGAAAGGTATCTGCAAAGCCAGTCTAAGTCCTCTCCCTCACTGCCAAAGGAAATGGTTGTGAAGTTACCACTGGCAGATTCAAGCATCACTACAGCAAAATTCATATCCAACAATCCCGGTGTGTTTAGTTCTCAAGATGAGTATTACAGTCAGCTGGTAAAAAATTATCCACCGCTGATTCCCATTGAAACCAATCACAAAGATGGGATTAACCTGAGTTCTTCCAACTTCACTGGATTTTCAAACGTTAAAAACTTGTACATAACTGGACATAGCAATGGAGCCATAACTTTTTGGGATGCATCATGTCCCTTTTTCACTCCAAATTTGCAATTAAAGCAACAGAATGAAAATGATTTTTCTTTTAGTGGTATACCCTTGACGGAATTATATTTTGATAGCAATTCTCCTGTCCTTGTTTCTGGTGACCAAAGTGGAATGGTTCGTATCTATAAATTCAAACCTGAACCATATGCCTCCAACAGCTTCATGTCTCTTACTGGTATTAAAGGGAATGATAATGTAATCCACAGTATGAAACTTGTAAAGATTAGTGGTGCTGTAATTTGTATGAACATAGATCCCAGGTCAAGGCATCTTGCGGTTGGTTCTGACCAAGGAAATGTTTCAGTTATTAACATAGATGGCCCATCTCTGTTATATCAGAAACATATTGCAAGTGAAATTACCACAGGTATCGTCTGCCTGCAGTTCAAAACCTGCAGTTTGCGTGGTTTTGAGAAAAACATTTTAGCAGTTGGAACAAAGGACTCATCTGTTCTGGTTCTAGATGGTGAAACTGGAAACTCACTGAGCATTGGAACTATTCATCCTAAAAAGCCCTCTAAAGCTATATTTATGCAGGTGCTGGATGGGCAAGGTGAACCAATCACAGGTTCAATTGAAAAAGATGGATCAGACTTGAGAAAAGGGAATCATGTTGAAGATGCAACAACAAACCAATTGTACATTTTGCTGTGTTCTGAGAAGGCTTTGTATGTCTATTCTTTTGTGCATGCTGTACAGGGAATTAAAAAGGTTCTTTACAAAAAGAAGTTTCATTCTTCTTCCTGTTGCTGGGCATCAACATTTTACAGGCTCTCTGATATCAGTCTCATACTCCTTTTCACCAGCGGGAAAGTAGAAATAAGGTGTTTGCCAGAGTTATCTCTTATAGTGGAATTTTCAATTAGAGGTTTCAATTATTCACCTCCAAAGTTGAAGTCATATTCTGACAGCCAGATATGTTGTTCATCCAAAGGAGATCTTGTTTTGGTGAAGGGTGACCAGGAAATTTTTGTTGTCTCATTGTTGGCCCAAAGGAATATTTTCAGGCTTTTGGACTCAGTTAGCTGCATCTATAGGAAGGAAAGGATGCTATCACAAGAAGAGTTTGTTCCCATCCCTGTCAGCCATAAGGAAAAGAAAAAGGTAAACAATTTGGTCTTTTTTTGGGCATTCCAGGGTATATTCAGCTCAATAATCAAAGATTTTACTGGCAGTAAAGAAAAGCATGTACCCCTCGTGGAAAAAGAAGATCCTAAAGAAAGTATACGGGAACTGTCAGCAATATTCTCAAATGCCAACTTTGCATGTGCTGGTAGCAATGATGATGACCAGACTATGGATGAAAATCAGCTTGAATTAAACATAGATGACATTGACCTAGAGGATCACGGAGAAAAATGCAAAGAAAAAAGCATATTGGGAGCTCTTAATAAGAAGAAATTGGCAGACAAATTTCAGTCTATAAAAGGAAGATTGAAAGAGATCAAGGGCAACAACCAGAAAGCATCAGACAAGGAAGGGCAACAAGATGAAAAAGCTGGTGCGCTTGATCAAATCAAGAAGAAATATGGATTTTCTTCCTCCAACGAATCAAGCATTGCTAAATTGGCACAAAGCAAGCTCCAGGGAAACACAAGGAAATTGCAGGGTATCAACCTACGTGCTACAGATATGCAAGATACAGCCAAATCATTCTCATCATTGGCAAAACAAATGCAGCGAACTACTGAGCAGTGTAGACATAGTTGA 3474 0.3837 MVDGHSASSSVEIWWIWANFESCMIGPLRVGPIWNSMYLSGVYEYDLAGTLSLVFIISDIIDGLSYELICYLLMEMFQFPFNIKFSVAISMGVGEKETKNPSC*FVLQPVGNSSDGLKASDVDPRLIFHQGIPSGGAKFAYDNIQKLLALSTKDGRIKLFGKDNAQVLLESSERVPSKFLQFIQNRGILINVTFNNHIEVWDMDKKLLSDMYIVKEEITCFSVIRHSLYMYVGFSNGNISVLKLDQEPWHVIRMKYTIPFSASYGNSTEESDDTVVTHILPQPAAESKRVLIIFRNGLIILWDIRESKSIVRTGGKISQPLFNETKKVSSACWVCPLGSKVVVGYNNGELFIWSIPSLNTGNGLVSNYSNQSTPRFKFNLGYKSDKSSIASVKWIYAEGKASRLYVMGVSDNAPSNLLQVVLLNEHTESRTIKLGLHMSEACVDMEIISTSSEQSKHRQNYFLLLGKSGHVYLYDDRLIERYLQSQSKSSPSLPKEMVVKLPLADSSITTAKFISNNPGVFSSQDEYYSQLVKNYPPLIPIETNHKDGINLSSSNFTGFSNVKNLYITGHSNGAITFWDASCPFFTPNLQLKQQNENDFSFSGIPLTELYFDSNSPVLVSGDQSGMVRIYKFKPEPYASNSFMSLTGIKGNDNVIHSMKLVKISGAVICMNIDPRSRHLAVGSDQGNVSVINIDGPSLLYQKHIASEITTGIVCLQFKTCSLRGFEKNILAVGTKDSSVLVLDGETGNSLSIGTIHPKKPSKAIFMQVLDGQGEPITGSIEKDGSDLRKGNHVEDATTNQLYILLCSEKALYVYSFVHAVQGIKKVLYKKKFHSSSCCWASTFYRLSDISLILLFTSGKVEIRCLPELSLIVEFSIRGFNYSPPKLKSYSDSQICCSSKGDLVLVKGDQEIFVVSLLAQRNIFRLLDSVSCIYRKERMLSQEEFVPIPVSHKEKKKVNNLVFFWAFQGIFSSIIKDFTGSKEKHVPLVEKEDPKESIRELSAIFSNANFACAGSNDDDQTMDENQLELNIDDIDLEDHGEKCKEKSILGALNKKKLADKFQSIKGRLKEIKGNNQKASDKEGQQDEKAGALDQIKKKYGFSSSNESSIAKLAQSKLQGNTRKLQGINLRATDMQDTAKSFSSLAKQMQRTTEQCRHS* 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0270 1156 Pfam Lethal giant larvae(Lgl) like, C-terminal 678 921 IPR013905 -
Apr7g0270 1156 Gene3D - 412 778 IPR015943 GO:0005515
Apr7g0270 1156 Gene3D - 135 411 IPR015943 GO:0005515
Apr7g0270 1156 SUPERFAMILY WD40 repeat-like 179 699 IPR036322 GO:0005515
Apr7g0270 1156 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 106 1154 - -
Apr7g0270 1156 SUPERFAMILY WD40 repeat-like 606 915 IPR036322 GO:0005515
Apr7g0270 1156 SMART WD40_4 493 578 IPR001680 GO:0005515
Apr7g0270 1156 SMART WD40_4 650 691 IPR001680 GO:0005515
Apr7g0270 1156 SMART WD40_4 203 242 IPR001680 GO:0005515
Apr7g0270 1156 SMART WD40_4 591 630 IPR001680 GO:0005515
Apr7g0270 1156 SMART WD40_4 313 353 IPR001680 GO:0005515
Apr7g0270 1156 CDD R-SNARE_STXBP5_6 1092 1151 - -
Apr7g0270 1156 MobiDBLite consensus disorder prediction 1136 1156 - -
Apr7g0270 1156 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 106 1154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0270 Apr-Chr7 8045265 8056185 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0270 - - aprc:113870100 2277.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0270 7 8045265 8056185 Apr7g0270 7 8045265 8056185 ECH
Apr7g0270 7 8045265 8056185 Apr3g0417 3 8133223 8148542 PCT