Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0417 ATGTTTGTGAAGAAGCTCGTGGAGAAAGCTTCCATAAAGAAGCCAAGTGGAAATTCATCAGGTGGGTTAAAAGCTAGTGATGTTGATCCACGGTTGGTATTTCATCATGGGGTACCATCAGGTGGTGCCAAGTTCGCCTATGATTCCATTCAGAAGATACTGGGTCTTTCTACAAAGGATGGCCGGATTAAACTATATGGAAAAGATAATGCTCAAACCCTGCTTGAATCTAGTGAGGCCCTACCTAGCAAGTTTCTACAGTTCATCCAGAACCAAGGTGTCCTTATAAATGTCACTTCCAATAACCATATTGAGGTTTGGGACATAGACAAGAAACTGTTGTCTGACAGGTACTTTGATAAGGAAGAAATCACTTGCTTTTCAGTCATTCAACATAGCCTCTACATGTACCTTGGACATTCTAATGGTAATATTTCAGTTTTGAAGCTTGATCAAGAACCATGGCACTTGGTTCAGATGAAATACACGATACCCCTCTCAGCTTCCTATGGTAATACTGAAGTGTCTGATGATACAGTTGTAACACATATATTGCCTCAACCAGCTGCTGAATTCAAGAGGGTTCTCTTAATCTTTAGAAATGGCCAAATAATACTATGGGATATTCTGGAAAGCAAATCTATTTTCAGAACCGGTGGAAATATGTCACAACCACTGTATAATGAAATGAAGAAAATAACTTCTGCATGTTGGGCATGTCCTTTTGGAAGTAAAGTGGTTGTAGGGTACAACAATGGAGAGATCTTTATTTGGAGCATCCCTTCTCAGAATATAGGAAATTGTTCAACACCAGAAAATAGTAATCAAAACACTCCTTTGCTCAAACTTAACTTAGGATACAAGTCAGACAAAATTTCCATTGGATCACTAAAATGGGTTTATGATGGAGGAAAGGCTAGTAGACTATATGTTATGGGAGCTTCCGACTATGCAACTTCAAACTTGTTGCAGGTAGTGTTGTTGAATGAGCATACAGAATCTCGCACAATTAAGCTTGGACTTCAATTGTCTGAATGTTGTATTGACATGGAGATCTTATCAACTTCAACTGAGCAAAGCAAGTACAAACAAGATTCTTTCTTGTTGCTTGGGAAGTCAGGCCATCTATATCTATATGATGATAGTTTGATTGAAAGGTATCTGCTACAATGCCAATCTAAGTCCGCACCTTCACTTCCAAAGGAAGTAATTGTGAAGTTACCGCTGGCAGATTCTAGAATCACAACAGCAAAATTCATCTCCAACAATCCCAATGTATTCAATTCTGATGATGAGTATTACAGACAGCTGGTCAAAAACTATCCACTTTTTGTTCCTGTTGAACTGAATCAAAAAGATGGGATAAGCCTGAGTTCTGCCAAATTTTATGGATTTTCAAAAGTTCAAAACTTGTACATAACTGGACACAGCAATGGAGCCATAACCTTCTGGGATGCTACATGCCCCTTTTTCACTCCTATTTTGCAATTAAAGCAACAGAGTGAAAATGACTTTTCACTAAGTGGTATACCCTTGTCAGCGTTATACTTTGATAGCAACACCCCTCTTCTTGTTTCTGGTGACCAGAGTGGAATGGTTCGCATCTTTAGATTCAAACCTGAACCATATGCCACTAACAGCTTCATTTCTTTTACTGGGGGTACAAAGAAAGGGACTGATCATATAATCCAAAGTATGAAACTTGTAAAGATAAATGGTGCCATACTTTCTATAAACATAGATTCCAGCTCAATGCATCTTGCTGTTGGTTCTGATCAAGGACATGTTTCAGTTTATAACTTGGATGGCCCAACTTTATTATATCAGAAACATATTGCAAGTGAATTTTCTGCTGGTATCATCTCCCTGCAGTTCCTGACCTGTGGCTTGCATGGTTTTGAGAAAAACATCTTACTGATTGGAACGAAAGATTCATCTGTTCTGGCACTTGATAAAGAAACTGGTAACACAATGGGCACGGGAACTGTTCATCCTAAGAAGCCCTCTAAAGCTCTATATATGCATGTGTTGGATGGACAAGGTGGACCAGTCACTGGATCAATCATGAAAGATGGGTTAGACTTGAGTGAAGGGAATCCTATTGACAATGCAACAACAAAGCAAGAATGCATTCTGATTTGTTCTGAGAAAGCTGTATATGTCTATTCATTGGTGCATGCTATTCAGGCTGTTAAAAAGGTGCTTTACAAGAAAAAGTTTCATTCCGCTTCCTGTTGCTGGGCATCAACATTTTACAGCCCTTCTGATATTGGCCTTGTACTCCTTTTCACTAGTGGAAAAGTAGAATTAAGGTCATTGCCAGAGTTATCCCTGATTATGGAGACTTCAATTAGAGGTTTCACTTATTCTCGTCCAAAATCAAAATCATTTTCTGACTGCCAGATATGTTGTTCATCCAAAGGAGACCTTGTTTTGGTGAATGCTGACCAAGAAATTTTTGTTCTCTCATTGTTGGTCCAAAGGAGTATTTTCAGGCTTTTGGACTCTGTTAGCTGCATCTACAATAAAGAGATGATGCTGTCACAAGAAGAGCTTGTCCCTGGTCCAGTTATCCATAAGGAAAAGAAAAAGGGCATATTCAGCTCTGTTATCAAAGATTTTACTGGCAGCAAAGAAAAGCATGTGCCCATCATGGAAACAGAAGATTCTAAAGAAAGAATCCAGGAACTCTCATTGATCTTTACTTATGAAAATTTTCCATGTGATACTGATAGTAACAGTAATCTGACTGTGGATGAAGATGAGGTTGAATTAAACATAGATGACATTCACCTAGACGATCATGAAGAAAAACGCAAAGAACAAAGTATATTGGGAGCTCTTAATAAGAAGAAATTGACTGGAAAATTTCAGGCTCTAAAAGGAAGATTGAAAGAGATGAAGGGAAACATGCAGAAAACATCAAGTAAGGAAGAGCAACAAGATGAGCAAGCTGGTGCGGTTGATCAAATTAAGAGGAAATATGGGTTTTCTTCTTCCTCCAATGAAACAAGCGTTGCTAAATTGGCAGAAAGCAAGCTGCAGGAGAACGTGAAAAAATTGCAGGGTATCAACCTCCGAACTACAGATATGCAAGATAAAGCAAAATCATTTTCATCATTAGCAAACCAAGTGCTGCGGACTGCTGAACAGGATAGGCGAAGTTAA 3168 0.387 MFVKKLVEKASIKKPSGNSSGGLKASDVDPRLVFHHGVPSGGAKFAYDSIQKILGLSTKDGRIKLYGKDNAQTLLESSEALPSKFLQFIQNQGVLINVTSNNHIEVWDIDKKLLSDRYFDKEEITCFSVIQHSLYMYLGHSNGNISVLKLDQEPWHLVQMKYTIPLSASYGNTEVSDDTVVTHILPQPAAEFKRVLLIFRNGQIILWDILESKSIFRTGGNMSQPLYNEMKKITSACWACPFGSKVVVGYNNGEIFIWSIPSQNIGNCSTPENSNQNTPLLKLNLGYKSDKISIGSLKWVYDGGKASRLYVMGASDYATSNLLQVVLLNEHTESRTIKLGLQLSECCIDMEILSTSTEQSKYKQDSFLLLGKSGHLYLYDDSLIERYLLQCQSKSAPSLPKEVIVKLPLADSRITTAKFISNNPNVFNSDDEYYRQLVKNYPLFVPVELNQKDGISLSSAKFYGFSKVQNLYITGHSNGAITFWDATCPFFTPILQLKQQSENDFSLSGIPLSALYFDSNTPLLVSGDQSGMVRIFRFKPEPYATNSFISFTGGTKKGTDHIIQSMKLVKINGAILSINIDSSSMHLAVGSDQGHVSVYNLDGPTLLYQKHIASEFSAGIISLQFLTCGLHGFEKNILLIGTKDSSVLALDKETGNTMGTGTVHPKKPSKALYMHVLDGQGGPVTGSIMKDGLDLSEGNPIDNATTKQECILICSEKAVYVYSLVHAIQAVKKVLYKKKFHSASCCWASTFYSPSDIGLVLLFTSGKVELRSLPELSLIMETSIRGFTYSRPKSKSFSDCQICCSSKGDLVLVNADQEIFVLSLLVQRSIFRLLDSVSCIYNKEMMLSQEELVPGPVIHKEKKKGIFSSVIKDFTGSKEKHVPIMETEDSKERIQELSLIFTYENFPCDTDSNSNLTVDEDEVELNIDDIHLDDHEEKRKEQSILGALNKKKLTGKFQALKGRLKEMKGNMQKTSSKEEQQDEQAGAVDQIKRKYGFSSSSNETSVAKLAESKLQENVKKLQGINLRTTDMQDKAKSFSSLANQVLRTAEQDRRS* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0417 1055 Gene3D - 49 338 IPR015943 GO:0005515
Apr3g0417 1055 Coils Coil 950 970 - -
Apr3g0417 1055 CDD R-SNARE_STXBP5_6 990 1047 - -
Apr3g0417 1055 MobiDBLite consensus disorder prediction 968 987 - -
Apr3g0417 1055 SUPERFAMILY WD40 repeat-like 512 821 IPR036322 GO:0005515
Apr3g0417 1055 SUPERFAMILY WD40 repeat-like 86 609 IPR036322 GO:0005515
Apr3g0417 1055 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 1 1054 - -
Apr3g0417 1055 Gene3D - 449 767 IPR015943 GO:0005515
Apr3g0417 1055 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 1 1054 - -
Apr3g0417 1055 SMART WD40_4 223 259 IPR001680 GO:0005515
Apr3g0417 1055 SMART WD40_4 400 485 IPR001680 GO:0005515
Apr3g0417 1055 SMART WD40_4 498 537 IPR001680 GO:0005515
Apr3g0417 1055 SMART WD40_4 559 600 IPR001680 GO:0005515
Apr3g0417 1055 Pfam Lethal giant larvae(Lgl) like, C-terminal 586 843 IPR013905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0417 Apr-Chr3 8133223 8148542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0417 - - gmx:100811900 1789.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0417 3 8133223 8148542 Apr3g0417 3 8133223 8148542 ECH
Apr7g0270 7 8045265 8056185 Apr3g0417 3 8133223 8148542 PCT