Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1401 ATGAAGAAGAGAGCTTCTACAATTTTGAAGTTGCTAGCTGCTTTGAGCTCAATGGCCAAATCAAAATCTTTAGCTCTCAAGTCCAAAACAAACGCCATCAAGGCTCGGTTGATAATATTCTCACTTGTGATGAACAAGAAGTATGTGATGAGCACTATTTCTGATAAGTTCCAATCTCTTTTGGGTCATCATTCACTTCCCAAAGAAGATTGCTCGTTGGAACATGGCAGTGATGACCAGAACAAGGACACTGTGGTGTTCAATGACAATGCACACTCCAACAAGGTAGTGTCCAATCCTAATGAGACCCAAGTAGTGGTGGAGGACAAAGATCATGATGGCCATGAAAGTTACTATAGGTATGGAGAAGATGATGATGGGGGTGATGGCAAGTACCCGGATCTTACACACACAATGTTTGAGTCAGAGGGTTTGGATCTTGAAGGCTCTGTGATTGATTTGGTGAAGTGTTCAAAGGAAGAGGCAGGGCAAGAGTTCAAAATGGAGGATGAAATTGACCATATGGCTGATCTTTTTATTCAGAAATTCCGAAGGCAAATCCTCTTGCAGAAGCAAGATTCTTTGAAAAGGTACCATGAAACGATGCTCAAATGA 615 0.4163 MKKRASTILKLLAALSSMAKSKSLALKSKTNAIKARLIIFSLVMNKKYVMSTISDKFQSLLGHHSLPKEDCSLEHGSDDQNKDTVVFNDNAHSNKVVSNPNETQVVVEDKDHDGHESYYRYGEDDDGGDGKYPDLTHTMFESEGLDLEGSVIDLVKCSKEEAGQEFKMEDEIDHMADLFIQKFRRQILLQKQDSLKRYHETMLK* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1401 204 Pfam Cotton fibre expressed protein 169 202 IPR008480 -
Apr6g1401 204 PANTHER COTTON FIBER PROTEIN 1 202 - -
Apr6g1401 204 PANTHER EMB|CAB67623.1-RELATED 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1401 Apr-Chr6 21510630 21511393 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1401 - - ccaj:109791419 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1401 6 21510630 21511393 Apr6g1401 6 21510630 21511393 ECH
Apr4g1511 4 16088096 16088983 Apr6g1401 6 21510630 21511393 PCT