Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1511 ATGAAGAACGGAACATCAAGGTCGTTGCTGAAGCAAATCATAGCCAATCTAAGTTCAATGGCCAAGTCAAAAACCATGGCCCTGAAGGCAAAAGCAAACACCATCAGGGGACGTTTGATTATATTCTCACTCATGAAGAACAAGAAATTATTGATGAGTTCTCTTTCTGAGAAGTTCCATTCTATGTGGGGGCATCACTCTCAGCCCAACAAGGAGGATTCATTGTTGGAAGATGGAAGTGAAAATAGCAGGGCCATAGTGGTGTACAACAACAATGCAAACTCTTATTACGAGGCTTTGCCAAATCCTTGTGAAACCCAAGTGGTGGAGGAACAAGACCAGGATGGCTATGAAAGTTACTACAACTATGGAGATGCTGATGCTGTTGATGATGATGACAAGTACCCGGATCTAACACACACCCTTTTTGATTCAGAGGGTTTGGATTTTGGAGGCTCAGTGATTGATTTGGTGAAGAATTCTAAGGAAGAAGCTGGGCAAGAGTTTAAGCTGGAGGATGAGATTAACCTTGCTGCTGATCTTTTTATCTTGAAGTTCCGCAGGCAAATGGTCTTGCAGAAGCAAGAGTCATTGAAGAGGAAGAGGGACATGCGGCAAAATGGTGCATGA 630 0.4317 MKNGTSRSLLKQIIANLSSMAKSKTMALKAKANTIRGRLIIFSLMKNKKLLMSSLSEKFHSMWGHHSQPNKEDSLLEDGSENSRAIVVYNNNANSYYEALPNPCETQVVEEQDQDGYESYYNYGDADAVDDDDKYPDLTHTLFDSEGLDFGGSVIDLVKNSKEEAGQEFKLEDEINLAADLFILKFRRQMVLQKQESLKRKRDMRQNGA* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1511 209 PANTHER COTTON FIBER PROTEIN 1 207 - -
Apr4g1511 209 PANTHER EMB|CAB67623.1-RELATED 1 207 - -
Apr4g1511 209 Pfam Cotton fibre expressed protein 172 204 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1511 Apr-Chr4 16088096 16088983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1511 - - gmx:100807332 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1511 4 16088096 16088983 Apr4g1511 4 16088096 16088983 ECH
Apr4g1511 4 16088096 16088983 Apr6g1401 6 21510630 21511393 PCT