Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1399 ATGGAGGCACACTCTCCAGTTATAGCAAAGAAGCTATGGAATGTGTTGAGGATCACCTTCTTCATGATCAGGAAAGGTTTGGTGTCAAAGAGGAAGCTTATTATGGACATGAATTTGATGATGAAGAAAGGGAAATTGCTTAGAAAATCTGTGAGCAATTTCATGTCAGCTCATCATCATCACAATTCAAAGAGTTTGGCACGTGGTGGCTATGGCATACAGGAATATGAATTCTCTTGTAGTAACAGTCCAAATCCTGTTTTTTACCACATGCCAAAGCGAAAGCACCATTTCAACTTCCCTTGCATGAACTCTCCTGAGGTTATTGAAGAGGAAGAAGAGCCTAGGCCAGTGGTTTTGGTTCCTATGACACCTGAATACACCTTCAACCTTAGGTTTGATGCTTCTGATTTTGCTTCTGGAGAGAGAAAGAGCCCTCTCCTCTCACCCTTCTCTGTGAGGATATCCAATTACTCATCTGAGGATGAAATTGAAGAGAGTGGAAATGGTCAAGTTGATGATCAAGCTGAGGATTTCATCAGAAGGTTCTATGAACAGCTAAGAATGCAAAGCCGCATGCAGTTGCTGCAGTACCAAGAGATGATGTAA 609 0.4187 MEAHSPVIAKKLWNVLRITFFMIRKGLVSKRKLIMDMNLMMKKGKLLRKSVSNFMSAHHHHNSKSLARGGYGIQEYEFSCSNSPNPVFYHMPKRKHHFNFPCMNSPEVIEEEEEPRPVVLVPMTPEYTFNLRFDASDFASGERKSPLLSPFSVRISNYSSEDEIEESGNGQVDDQAEDFIRRFYEQLRMQSRMQLLQYQEMM* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1399 202 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 201 - -
Apr6g1399 202 PANTHER OS01G0930500 PROTEIN 1 201 - -
Apr6g1399 202 Pfam Cotton fibre expressed protein 170 202 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1399 Apr-Chr6 21476655 21477620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1399 - - gmx:100780921 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1399 6 21476655 21477620 Apr6g1399 6 21476655 21477620 ECH
Apr4g1512 4 16105503 16106144 Apr6g1399 6 21476655 21477620 PCT