Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1512 ATGGAGGCACATTCTCCTGTTGTAGCCAAGAGACTATGGAATGTGCTGAGGGTGACCTTCTTCATGATTAGGAAGGGGCTCATATCAAAGAGGAAAATGATTATGGACATGAATTTGATGATGAAGAAAGGGAAGCTGGTGATAAAATCTCTGAGCAATTTCATGTATTCCCATCATCATCACCACCACAAAAATGCAGAGAGTGTGGCACATGGTGGCTTTGGGGTACACTATGAATTTTCTTGTAGCAATAGTCCAAATCCTGTTTTTCTCCACATGCCAAAGCGGAAGCATCATTTCAGCTTCCCCTGCATCAATTCCCCTGAGGTTGTGGAAGAGGAGGAGCCTCAATTGTCATTTGAAGTAGAAAACGATGTGCCTAAGGCTGTGGTTATGGTACCCAAGACCCCAGAATACATGTTCAACTTTAGGTTTGATGCAAATGAGTTTGCTTGTGGGGAGAAAAAGAGTCCACTTCTCTCACCATTCTCTGTGAGGGTGTCCAATTACTCAGCTTTGGATGAGAATGAAGAGGTTGGAAATGGGCATGTTGATGATCAGGCTGAGGATTTCATTAGAAGGTTCTATGAACAGCTAAGGACTCAGAGTCCCATGCAATTCCTACGTTACCCAGAGATGTAA 642 0.4346 MEAHSPVVAKRLWNVLRVTFFMIRKGLISKRKMIMDMNLMMKKGKLVIKSLSNFMYSHHHHHHKNAESVAHGGFGVHYEFSCSNSPNPVFLHMPKRKHHFSFPCINSPEVVEEEEPQLSFEVENDVPKAVVMVPKTPEYMFNFRFDANEFACGEKKSPLLSPFSVRVSNYSALDENEEVGNGHVDDQAEDFIRRFYEQLRTQSPMQFLRYPEM* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1512 213 Pfam Cotton fibre expressed protein 183 213 IPR008480 -
Apr4g1512 213 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 212 - -
Apr4g1512 213 PANTHER OS01G0930500 PROTEIN 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1512 Apr-Chr4 16105503 16106144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1512 - - gmx:100806803 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1512 4 16105503 16106144 Apr4g1512 4 16105503 16106144 ECH
Apr4g1512 4 16105503 16106144 Apr6g1399 6 21476655 21477620 PCT