Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1077 ATGGGTTCGACGAGGGTACCCAAGTTGGGGTCCTTCAGACACAGCTTCGCGGAGAAGAAGGAGAGGCTGCTTTCGATGAAGTCACAGATTGGGATCGCTCTGCCGGAGTCGGACGAGGAGCAGTTCTCGCCGGCGAGAAGACGGTGCTGCTCCTACCGTGCTTTTTCTGACGGGATGGTGAGCGGGTGGAGGAGCGTGAAGCGCGTGGCGGGGAGAGCGTGGGAGATGGGACGGTCTGATCCCCGGAAGATCGTGTTCTCAGCGAAAATGGGAGTGGCTCTCATTCTCATTTCCCTTTTGATTTTCCTCAAAAAACCCTTTCCCGATGTTAGTCGATACTCCGTTTGGGCCATTCTCACTGTCGTCGTTGTCTTTGAATTCAGCATAGGGGCAACTCTTAGCAAAGGGCTTAACAGAGGATTGGGGACTTTGTTAGCTGGAGGACTTGCTATGGGAATTGGAGCTTTGTCAAAGTTGGCTGGAAAATGGGAAGAACTCATAGTAATGATTAGCATCTTCACTGCAGGATTTTGTGCCACATATGCAAAACAGTACCCAACAATGAAGGCTTATGAATATGGTTTCCGTGTGTTCTTGATCACCTATTGCTACATTATTGTATCTGGGTATCGAACAGGAGAATTTGTTGATACAGCTATAAATAGATTTTTGCTCATTGCACTTGGTGCTGCTGTATCTCTAGGGGTAAATGTATGTATTTATCCAATCTGGGCTGGTGAGGATCTACATGATCTGGTGGCCAAAAATTTCATGGGAGTTGCAACATCATTGGAAGGTTGTTGCTCACAGTGTTATTTCCTTGGTGGAATAACGTTGTTAAGCTTCTTTTCAGGTGTTGTTAACAACTATCTTAATTGTATTGAATATGAGAGAGTGCCTTCAAAGATTCTTACATACCAAGCTGCTGAGGATGTGGTTTACAAGGGATACAGATCAGCTGTAGAATCTACAAGCACAGAGGATACATTGATGGGTTTTGCTGTATGGGAGCCACCTCATGGTCGTTACAAAATGCTTAGATATCCATGGCAAAATTATGTGAAAGTAAGTGGGGCACTAAGGCATTGTGCATTTATGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCTCCAGCTGAGAAGAGACAAGTTTTTCGTAATGAGCTACAAAAGGTAGGTTCTGAAGGGGCGAAAGTACTCCGGGAACTTGGTAACAAAGTTAAGAACATGGAGAAACTAGGCCAGGAAGACATTCTTTACGAAGTACATGATGCAGCAGAAGAATTGCAACAGAAAATTGACAAAAAATCTTTCCTGCTTGTAAATTCAGAGAGCTGGGAAATTGGAAACCGGCCAAGAGGGGAGGGTGATTCTCATGACCTCTTAAACATCGATGAAGAAAGACATTTCTTGGAGTACAAGTCTCTTAGCGAAGCCGTGCTTGATCTCAGAACTGTCAAGGTTCCAAGAAGTTGGGAAGAACAAGCTTCACCTGACCCTAAACCTGCAATGCCTGCAACTGTTGGTGATGAAAACATGTTCAGGAAACAAATATCTTGGCCTGCTCATATTTCCTTTAAAGCTGATGCAGTGACAAAAGAGGAAGAATCCAAGACTTATGAAAGTGCTAGTTCACTGTCTCTAGCAACATTTACATCCCTACTGATTGAGTTTGTGGCAAGGCTCCAGAACCTTGTGGATTCTTTTGAAGAATTAGGTGAGAAAGCAAAATTTAAGGACCCTCTTCAGCAAGCGCCAGCAAGTTCTGGTGGGTATTGTAACGGCTTGTTTAATTGTTTGATACTCAAAGATTGA 1824 0.4413 MGSTRVPKLGSFRHSFAEKKERLLSMKSQIGIALPESDEEQFSPARRRCCSYRAFSDGMVSGWRSVKRVAGRAWEMGRSDPRKIVFSAKMGVALILISLLIFLKKPFPDVSRYSVWAILTVVVVFEFSIGATLSKGLNRGLGTLLAGGLAMGIGALSKLAGKWEELIVMISIFTAGFCATYAKQYPTMKAYEYGFRVFLITYCYIIVSGYRTGEFVDTAINRFLLIALGAAVSLGVNVCIYPIWAGEDLHDLVAKNFMGVATSLEGCCSQCYFLGGITLLSFFSGVVNNYLNCIEYERVPSKILTYQAAEDVVYKGYRSAVESTSTEDTLMGFAVWEPPHGRYKMLRYPWQNYVKVSGALRHCAFMVMAMHGCILSEIQAPAEKRQVFRNELQKVGSEGAKVLRELGNKVKNMEKLGQEDILYEVHDAAEELQQKIDKKSFLLVNSESWEIGNRPRGEGDSHDLLNIDEERHFLEYKSLSEAVLDLRTVKVPRSWEEQASPDPKPAMPATVGDENMFRKQISWPAHISFKADAVTKEEESKTYESASSLSLATFTSLLIEFVARLQNLVDSFEELGEKAKFKDPLQQAPASSGGYCNGLFNCLILKD* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1077 607 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 5 605 - -
Apr6g1077 607 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 5 605 - -
Apr6g1077 607 Pfam Aluminium activated malate transporter 74 576 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1077 Apr-Chr6 15439514 15445551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1077 8 584 Miscellaneous Gene Families AT3G18440 61.204 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1077 - - gmx:100810157 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1077 6 15439514 15445551 Apr2g1446 2 20505268 20509110 ECH
Apr6g1077 6 15439514 15445551 Apr6g1077 6 15439514 15445551 ECH
Apr2g1446 2 20505268 20509110 Apr6g1077 6 15439514 15445551 PCT