Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1446 ATGGTTCCCAAGTTGGTGAAATCGGGCTCCTTTCGTCACGGTTTTGCGGAGAAGAAGGAGAAGCTTCTCTCTATGAAGGGTGCTGGTTATTCCCAGATTGGGCTTCCCATGCAGGATGAGGAGGAGCAATCATGGATCGTCAAGTCGTTCAAGACGGTGCAGCGTGTTGTTGCCAAGGCTTGGGAAATGGGTCGCTCTGATCCTAGGAAGATTATCTTCGCCGCTAAAATGGGTCTTGCTTTGACCCTTATTTCGCTTTTGATTTTCCTCAAAGAACCCTTAGGGGATATGAGTCGTTACTCCGTTTGGGCTATTCTAACTGTCGTCGTTGTCTTTGAATTCAGTATAGCAACTCTGAACAGGGGGTTTAACAGAGGATTGGGGACATTATCGGCTGGAGGACTTGCTCTTGGGATGGCAGAGTTATCAGCATTGGCTGGAGAATGGGAGGAACTAGTAATTATCATCAGCATCTTCATTGTAGGATTTTGTGCCACTTATGCAAAACTATACCCAACTTTGAAGTCTTATGAGTATGGGTTCCGTGTGTTCTTGATCACGTATTGCTTCGTTATGGTATCTGGATATCGAACAGGGGACTTTGTGGTTACAGCTATAAATAGATTTTTTCTCATTGCAATTGGTGCTGCTGTATCTTTGGGAGTAAATATCTGCATATACCCAATCTGGGCTGGTGAGGATCTGCATGACCTTGTGACAAAGAATTTCATGGGTGTTGCAACATCTTTGGAAGGTGTTGTAAATCACTACCTAAATTGTGTTGAATATAAGAAGGTCCCATCTAAAATTCTTACTTACCAAGCTGCTGATGACCCAGTTTACAATGGCTATAGATCGGTGGTTGAATCTACAAGTAAAGAGGATTCATTGATGGGATTTGCTGTTTGGGAACCCCCACATGGACATTACAAAATGCTTAAATATCCCTGGAAGAATTATGTGAAGTTAAGTGGGGCCCTAAGGCATTGTGCATTTATGGTCATGGCTATGCATGGATGCATACTTTCTGAAATACAGGCCCCAGCGGAGAAGAGACAAGTTTTCTGTAGTGAGCTTCAGAGGGTAGGTTCCGAAGGGGCAAGAGTGTTGCGTGAACTTGGAAACAAAGTTAAAAAGATGGAGAAGCTAGGCCGGGGAGACTTGTTGTATGAAGTGCACGAAGCAGCAGAAGAATTGCAACAGAAAATTGATAAAAAATCGTACCTTCTTGTGAATTCAGAGAGCTGGGAAATTGGAAACCGGCCGAGAGAAGATAGTGAGCCTCAACAAGGCCTCTTTAACATGGATGAAGAAAGAAAATTTCTTGAGTACAAGTCTCTCAGTGAAGCAGTACTTGATCTCAGAACAGTTGAAGTTCCAAAAGGTTGGGATGGGAATTTAACTTTAGGTGATAAGCCTGCTGTGCCTGACTCTGAAAACATGTTTAGGAAACAGATATCTTGGCCTGCTCATATTTACTATAAATCAAGTGCAGTGACAAAAGAGGATCCAGAATCAAAAACTTATGAAAGTGCTAGTGCACTATCTCTGACAACATTTACATCACTTCTGATTGAGTTTGTTGCAAGGCTTCAAAACCTAGTGGATTCATTTGAAGAACTAGGTGAAAAGGCAAACTTTGCAGACCCACTTGAGCAACAAGCACCAGTAACATCGTCTGGGTTTTGGGCCAGGTTGTTTAACTGCTTAAAATTCAAGGATTGA 1725 0.4267 MVPKLVKSGSFRHGFAEKKEKLLSMKGAGYSQIGLPMQDEEEQSWIVKSFKTVQRVVAKAWEMGRSDPRKIIFAAKMGLALTLISLLIFLKEPLGDMSRYSVWAILTVVVVFEFSIATLNRGFNRGLGTLSAGGLALGMAELSALAGEWEELVIIISIFIVGFCATYAKLYPTLKSYEYGFRVFLITYCFVMVSGYRTGDFVVTAINRFFLIAIGAAVSLGVNICIYPIWAGEDLHDLVTKNFMGVATSLEGVVNHYLNCVEYKKVPSKILTYQAADDPVYNGYRSVVESTSKEDSLMGFAVWEPPHGHYKMLKYPWKNYVKLSGALRHCAFMVMAMHGCILSEIQAPAEKRQVFCSELQRVGSEGARVLRELGNKVKKMEKLGRGDLLYEVHEAAEELQQKIDKKSYLLVNSESWEIGNRPREDSEPQQGLFNMDEERKFLEYKSLSEAVLDLRTVEVPKGWDGNLTLGDKPAVPDSENMFRKQISWPAHIYYKSSAVTKEDPESKTYESASALSLTTFTSLLIEFVARLQNLVDSFEELGEKANFADPLEQQAPVTSSGFWARLFNCLKFKD* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1446 574 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 573 - -
Apr2g1446 574 Pfam Aluminium activated malate transporter 61 542 IPR020966 GO:0015743
Apr2g1446 574 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1446 Apr-Chr2 20505268 20509110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1446 7 550 Miscellaneous Gene Families AT3G18440 61.658 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1446 - - gmx:100777792 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1077 6 15439514 15445551 Apr2g1446 2 20505268 20509110 ECH
Apr2g1446 2 20505268 20509110 Apr2g1446 2 20505268 20509110 ECH
Apr2g1446 2 20505268 20509110 Apr6g1077 6 15439514 15445551 PCT