Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1049 ATGAAGAATAATAAGCAACAAGGCACAAGTGCAGCCTCATATCTAAATCTCTTCAGTGCTCAACTCTACCTTCTCAACTTCTTTGCTCATATTCTAGTCTTTGGTTGTGGTTTACTCATTGGCATAACTATCACTTTTGGTGTCAGGAACCTTTCCCTCAACTTTCAACTCCAAAAATACACCATCCCGTCAAATACCCTCAAATCACCACCTTTGTCTCCTTCTCCTCCAATCTCATCAAACATCACATTGATATCAAATAACCAAACAAAACCACCTTCTAATTCTTCTTCCCTTATAAATAAGAAAAGGGTTATAATAACCAAAAACTTCACAAGAATTGGGTTGAGGGAATTCTTGAAGCCTCCCATGGCCATGCATGATATGAGTGATGAAGAGTTGTTGTGGAGAGCCTCCATGGTTCCTAGGATTCATAAACTACCATTCAAACAGACCCCAAAGGTTGCATTTTTGTTCTTGACAAAAGGTCCTGTGTTGTTGGCTCCTCTTTGGGAAATGTTCTTCAAAGGAAATGAAGGGTTGTATTCTGTCTATGTCCATTCCGATCCTTCTTTCAATGGAACTTTGCCTCAAAATTCAGTGTTCCATGGCCGCAGAATCCCCAGCAAGGAGGTAAGGTGGGGAGAGAATAGTATGATAGAGGCAGAGAGACGCCTACTAGCCAATGCACTCCTTGATTTCTCAAACCAACGTTTTGTTCTACTTTCAGAATCTTGCATCCCTTTATTCAATTTCTCCACCATCTACACTTATCTAATGAACTCAAACAAGATCTTTGTGGAAGCCTATGATCTTCCAAATGAAGTAGGGCGTGGCAGGTACAGCCACAAAATGAGGCCAATTATTAGACTCTCCCAATGGAGAAAAGGGTCACAATGGTTTCAAATAGACCGTGCCATTGCCCTTCAAATAGTCTCTGATCACCAATATTTCCCAGTGTTCAAAAAGTACTGCAATCCTCAATGCTACAGTGATGAACATTATTTGCCCACATTGGTTAGTATCAAATTTTGGAAGAGGAACTCTAATAGGACTTTGACTTGGGTTGATTGGTCAAAGGGTGGACCCCATCCTTCAAAGTATATAAGGACAGACGTTACTTATGAGTTTTTGAACAAATTAAGGTTTGGAAGCTCATGTGAGTACAATGGACATATCACCAATGTTTGTCATTTGTTTGCAAGGAAATTCACACCTCATGCTTTGGATAGACTGCTTAGATTTGCTCCTAAGATCATGCAATTCAATTGA 1272 0.4002 MKNNKQQGTSAASYLNLFSAQLYLLNFFAHILVFGCGLLIGITITFGVRNLSLNFQLQKYTIPSNTLKSPPLSPSPPISSNITLISNNQTKPPSNSSSLINKKRVIITKNFTRIGLREFLKPPMAMHDMSDEELLWRASMVPRIHKLPFKQTPKVAFLFLTKGPVLLAPLWEMFFKGNEGLYSVYVHSDPSFNGTLPQNSVFHGRRIPSKEVRWGENSMIEAERRLLANALLDFSNQRFVLLSESCIPLFNFSTIYTYLMNSNKIFVEAYDLPNEVGRGRYSHKMRPIIRLSQWRKGSQWFQIDRAIALQIVSDHQYFPVFKKYCNPQCYSDEHYLPTLVSIKFWKRNSNRTLTWVDWSKGGPHPSKYIRTDVTYEFLNKLRFGSSCEYNGHITNVCHLFARKFTPHALDRLLRFAPKIMQFN* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1049 423 PANTHER CORE-2/I-BRANCHING ENZYME 6 422 - -
Apr6g1049 423 Pfam Core-2/I-Branching enzyme 155 381 IPR003406 GO:0016020|GO:0016757
Apr6g1049 423 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 6 422 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1049 Apr-Chr6 15176243 15180124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1049 - - gmx:100791882 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1049 6 15176243 15180124 Apr2g1467 2 20710101 20713195 ECH
Apr6g1049 6 15176243 15180124 Apr6g1049 6 15176243 15180124 ECH
Apr2g1467 2 20710101 20713195 Apr6g1049 6 15176243 15180124 PCT