Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1467 ATGAAGAATAATAAGCACCAAGAACGTTCCTGTGCAACAGCCAAACTCTTCAGTGCTCAACCACATATGCTTAACTTCTTTCATGTCCTTGTATTTACTATTGGTTTTTTCATTGGAATCACCATCACTTTCTATTTCAAAGACTTGTCTCTCAACTTTCAATTCCAGCAAGTTCTCCACCCATCTTTCTCTCCTTCTGTTCTCATCTCAACGTCAAATAATCATACGAAAGTCACCAACTTCACCCAAAATGGGTTAAGGGGTTTCTTAAGACCAACCAAGGCTATGCACGATATGACTGAAGAAGAGTTGCTGTGGAGAGCTTCTATGGTTCCTAGGATTCAGAAACTCCCATTCAAACACACCCCAAAGGTTGCATTTATGTTTTTGACAAAAGGACCTGTGTTTTTGGCTCCTCTATGGGAGAGATTCTTCAAAGGAAATGAAGGGTTATATTCTATCTATATCCATTCACACCCTTCTTTCAATCAAACAGTGCCTACAAATTCTGTCTTTCATGGCCGCAGAATCCCAAGCAAGGAGGTAAGATGGGGTGACTTCAACATGATAGGGGCAGAGAGGCGTCTCCTAGCAAATGCACTTCTTGACTTTTCAAACCAACGTTTTGTTCTACTCTCAGAATCATGCATTCCCTTGTTCAACTTCTCAACTATCTATAATTACCTTATGAACTCAACCAAGACCTTTATAGAAGCCTATGATATGCCAGGCTCAGTGGGTAGAGGGAGGTACAGCCCAAGGATGAGGCCACAAGTTAAGCTTTCTCAGTGGAGGAAGGGCTCACAATGGTTTCAAATAGACCGTGCCCTTGCCATTGAGATAGTCTCTGATCAACAATACTTCCCAGTGTTTAAGAAGTATTGCAGGAATGGATGTTATGGTGATGAACACTACTTGCCCACTTTGGTTAGTATCAAATTTTGGCAGAGGAACTCCAATAGAACTTTGACATGGGTTGATTGGTCAAGGGGTGGACCCCATCCATCCAGGTTTATGAGAACGGATGTGACTGTTGAATTTTTGAATAGGCTAAGGTATGGGAGAAAATGTCAATACAATGGCAAGAGCACCAATGTTTGTCATTTGTTTGCAAGAAAGTTCATGCCCCAGGCTTTAGATAGATTGTTGAGGTTTGCTCCACGGATAATGCAATTCAATTGA 1182 0.4146 MKNNKHQERSCATAKLFSAQPHMLNFFHVLVFTIGFFIGITITFYFKDLSLNFQFQQVLHPSFSPSVLISTSNNHTKVTNFTQNGLRGFLRPTKAMHDMTEEELLWRASMVPRIQKLPFKHTPKVAFMFLTKGPVFLAPLWERFFKGNEGLYSIYIHSHPSFNQTVPTNSVFHGRRIPSKEVRWGDFNMIGAERRLLANALLDFSNQRFVLLSESCIPLFNFSTIYNYLMNSTKTFIEAYDMPGSVGRGRYSPRMRPQVKLSQWRKGSQWFQIDRALAIEIVSDQQYFPVFKKYCRNGCYGDEHYLPTLVSIKFWQRNSNRTLTWVDWSRGGPHPSRFMRTDVTVEFLNRLRYGRKCQYNGKSTNVCHLFARKFMPQALDRLLRFAPRIMQFN* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1467 393 Pfam Core-2/I-Branching enzyme 125 351 IPR003406 GO:0016020|GO:0016757
Apr2g1467 393 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 6 392 IPR044174 GO:0016757
Apr2g1467 393 PANTHER CORE-2/I-BRANCHING ENZYME 6 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1467 Apr-Chr2 20710101 20713195 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1467 - - gmx:100815747 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1049 6 15176243 15180124 Apr2g1467 2 20710101 20713195 ECH
Apr2g1467 2 20710101 20713195 Apr2g1467 2 20710101 20713195 ECH
Apr2g1467 2 20710101 20713195 Apr6g1049 6 15176243 15180124 PCT