Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1019 ATGTCGCTCCACGGCGGCAGCTCCAGCGACCGCCGGGACGCGCCGTCTCCGGGGACGGGGAATGCCGGCGGAAAAGGCAACGTGGTCGTGGCGTCGAGCCAGAGGCTGCGGCTGAACCCTAACAAGGACCACAAGCCAGAGGATTACGCAGACATGCAATTAGATTTCAGCCCTTCCATTTTCAGTTCTTTGGAGAGGTATCTTCCTCCGAACATGCTCAATGTGCCTCGTGATGAAAAGGCCAAGTTCATGCGCGAGATTCTCCTCAAGTATCTGCCCCTCGGAGAGCGCAACAGAGCTCAAAAGCATAGGGAATACAGACAGAAGATAATATCAAATTATCAGGTATGTAGTAACCAAAAGCCTCTACATCGAGAGCTATACTCTATGAATCCTGCTACATTCTTTGTCCCTGCATTTCTGAAAGCAATTAATGATAATACAGAGCAAAGCTTTAGAAGCGTCATGTCTGAGCCCTCTCCAGGCATTTTTGTATTTGACATGTTTCAACCAAGCTTTTGTGAGTTATTGCTATCTGAGATTGAAAATTTTGAGAAGTGGGTGACTGAAACAAAATTTCGGATCATGCGTCCCAATACCATGAATAAATATGGTGCTGTACTTGATGACTTTGGGCTTGAAACAACACTTGACAAGCTCATGGAAGGTTTCATTCGTCCTTTATCTAGAGTCTTCTTTGCAGAAGTTGGTGGATCAACCCTGGATTCTCATCATGGTTTTGTTGTTGAATATGGTAAAGATAGAGATGTTGACTTGGGTTTCCATGTGGATGATTCGGAGGTAACCTTAAATGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAATTGTTTTTTCGTGGCACACGATGTGAGAAACATGTAAATACCGGAAGTCATTCAGAGGAGATCTTTGATTATTCTCATGTCCCTGGACGAGCTGTGCTTCATCGTGGTCGTCATCGCCATGGTGCTAGAGCTACAACATCTGGTCATCGAGTCAACCTACTTCTGTGGTGCAGAAGTTCTGTCTTTAGAGAGATGAAACGGTATCAAAAAGATTTCTCCAGCTGGTGTGGCGAGTGCAATCGTGAGAAAAAGGAAAAGCAACGCTCCACAATTGCTGCTACCAGATTGGAATTGTTCAGGAGGGAAAGTGAATCCGCCGCATAA 1170 0.4556 MSLHGGSSSDRRDAPSPGTGNAGGKGNVVVASSQRLRLNPNKDHKPEDYADMQLDFSPSIFSSLERYLPPNMLNVPRDEKAKFMREILLKYLPLGERNRAQKHREYRQKIISNYQVCSNQKPLHRELYSMNPATFFVPAFLKAINDNTEQSFRSVMSEPSPGIFVFDMFQPSFCELLLSEIENFEKWVTETKFRIMRPNTMNKYGAVLDDFGLETTLDKLMEGFIRPLSRVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGTRCEKHVNTGSHSEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFREMKRYQKDFSSWCGECNREKKEKQRSTIAATRLELFRRESESAA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1019 389 Gene3D q2cbj1_9rhob like domain 161 341 - -
Apr6g1019 389 MobiDBLite consensus disorder prediction 1 15 - -
Apr6g1019 389 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 19 388 - -
Apr6g1019 389 SMART p4hc 161 340 IPR006620 GO:0005506|GO:0016705|GO:0031418
Apr6g1019 389 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 242 341 IPR005123 -
Apr6g1019 389 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 388 - -
Apr6g1019 389 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1019 Apr-Chr6 14888196 14895262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1019 - - gmx:100816390 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1019 6 14888196 14895262 Apr2g1537 2 21268728 21275109 ECH
Apr6g1019 6 14888196 14895262 Apr6g1019 6 14888196 14895262 ECH
Apr2g1537 2 21268728 21275109 Apr6g1019 6 14888196 14895262 PCT