Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1537 ATGTCGCTTCGCGGTTGCTCCACTGACCGCGGGAAGGCAGCGTTGCCGGCGACCGGGAACGCCGATCGCCGCGGCGGAGACGGCTTCGCGGTTGGGGACTCTGACACTGACGATAACCAGAATTTGAGGTTGGTGCTGAATCCGCACAAGAATCACAAGCCGGAAGAGTACGATGACTTGGAATTGGATTTCTCACCCGCGATTTTCAGCTCGATGGAGAGGCACCTCCCATCCACAATGCTCGATGCGTCCCGTGACGATAAGGTCAAGTACATTCGCGACATTCTGCTCGATTATCTGCCACCGGGAGAGCGAAACAGAGATCAAAAACAAAGAGAATACAGACAGAAGATATTAGCAAATTATCAGCCTCTGCATCAAGAGTTGTACACTATTGATCCTACAACATTCTTTGTCCCAAAGTTTCTGAAAGCAATTAATGATAATACAGAACAAAGCTTTAGAAGTATAATGTCTGAGCCCGCTCCAGGCATTTTTACATTTGAGATGCTTCAGCCACACTTTTGTGAGTTATTGGTATCTGAGGTTGAAAATTTTGAGAAGTGGGTTAAAGCAGCAAAATTTCAGGTTATGCGTCCCAGTACTATGAATAAATATGGTTCTGTACTTGATGACTTTGGCCTTCAAACCATGCTTGACAAGCTTATGCAAGGTTTTATCTGTCCTTTGTCAAAAGTATTTTTTGCAGAAATTGGTGGATCAACTCTAGATTCTCATCATGGCTTTATTGTTGAATATGGTAAAGATAGAGATGTTGACTTGGGTTTACATGTCGATGACTCGGAGGTAAGCTTAAATGTTTGCTTGGGTAGGCAATTTTCTGGAGGGGAATTGTTTTTTCGGGGCATGCGATGTGATCAGCATGCACATACAGAAAGTTATTCAAAGGAGGTCTTTGACTATTCCCATGTCCCTGGACAAGCTGTGCTTCATCATGGTCGTCATCGCCATGGTGCTAGAGCTACAACATCGGGTTATCGTATCAATCTACTTCTATGGTGCAGAAGTTCTGTTTTTAGAGAGATGAAAAGGTATAAAAATGATTTCTCTACCTGGTGTGCTGTGTGCTATCAAGAGAGGAAAAACAGGCTGCTCGAGTCAATTGATGAGACCAGATTGGCACTGTCCAGGAGGGAGGGCAAAACAATTGCATAA 1176 0.443 MSLRGCSTDRGKAALPATGNADRRGGDGFAVGDSDTDDNQNLRLVLNPHKNHKPEEYDDLELDFSPAIFSSMERHLPSTMLDASRDDKVKYIRDILLDYLPPGERNRDQKQREYRQKILANYQPLHQELYTIDPTTFFVPKFLKAINDNTEQSFRSIMSEPAPGIFTFEMLQPHFCELLVSEVENFEKWVKAAKFQVMRPSTMNKYGSVLDDFGLQTMLDKLMQGFICPLSKVFFAEIGGSTLDSHHGFIVEYGKDRDVDLGLHVDDSEVSLNVCLGRQFSGGELFFRGMRCDQHAHTESYSKEVFDYSHVPGQAVLHHGRHRHGARATTSGYRINLLLWCRSSVFREMKRYKNDFSTWCAVCYQERKNRLLESIDETRLALSRREGKTIA* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1537 391 SMART p4hc 163 342 IPR006620 GO:0005506|GO:0016705|GO:0031418
Apr2g1537 391 MobiDBLite consensus disorder prediction 1 39 - -
Apr2g1537 391 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 35 389 - -
Apr2g1537 391 Gene3D q2cbj1_9rhob like domain 164 343 - -
Apr2g1537 391 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 244 343 IPR005123 -
Apr2g1537 391 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 35 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1537 Apr-Chr2 21268728 21275109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1537 - - qsu:111987273 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1019 6 14888196 14895262 Apr2g1537 2 21268728 21275109 ECH
Apr2g1537 2 21268728 21275109 Apr2g1537 2 21268728 21275109 ECH
Apr2g1537 2 21268728 21275109 Apr6g1019 6 14888196 14895262 PCT