Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1015 ATGAAAGGAGTTTCAAGGCAGGAAGTGGGAGAAGAAGTGAAGCAGCAGCTGAGGTTAGCTGGGCCTCTTTTCACTGTGGGCCTTCTGCAGTACAGTTTGCAGGTGATATCTGTCATGTTTGTGGGCCATCTTGGTGAATTGCCACTTTCCGCTGCTTCAGTTGCTACTTCCTTTGCATCTGTCACTGGTTTCAATTTGTTGATGGGCATGGCTAGTGCATTGGATACGTTATGCGGCCAATCATTTGGAGCAGGACTGCACAATATGCTTGGCATACACATGCAAAGAGCTACCTTTGTTCTCTCATTTGTAAGTGTCTTTCTAGCAATCATGTGGGCCTTTGCCAAACACATTCTAGTTGCCATGCACCAGCAAGTAGCCATAGCTGAGGAGGCTGGTGTATATACCCTTTACATGATTCCAAGCCTTTTTGCTTATGGTGTCCTTCAATGCCTTCTCAAGTTTCTAAACTCTCAAACCATTGTCGTCCCTATGATGTTGGTCTCTGCAATGGTGGCTTTATTTCACATACTTTTATGTTGGATGTTAGTTACTAAGTCAGGACTTGGAAGTAAGGGAGCTGCCATAGCAAATTCAGTATCGTATTGGCTAACTGTGATGCTGATAGCACTTTATGTGAAGTTTTCTTCCTCATGTGAAAAATCATGGACTGGCTTCTCAAAGAAGGCCCTGCAAGATATCCCAGAATTTCTTAAAATTTCTATTCCTTCAGCTGTTATGCTTTGCTTAAAGGTTTGGACATTTGAACTAATGGTTCTGCTATCTGGTCTTCTTCCAAATCCACAGTTAGAAACTTCAGTTTTATCTATATGTCTCAATACATTTTCAATTGCCTGGATGATTCCCTTTGGATTAAGCTGCGCTGTGAGCACAAGGGTCTCAAATGAACTAGGAGCTGGGCATCCCCAAGCTGCAAGTCTTGCAGTTCAGGTTGCTCTCTTCATGTCCTTTGTTGAGGGTGTTATGATAGTATTACTCATGATTCAACTTAGAAAAATATGGGGCAATCTTTACAGCAGTGAAACAGAAGTTATAAAATATGTAGCAGCCATGATGCCTATTCTCGCTATCTCCAGCTTCCTTGATGGGATTCAAAGTGTTCTTTCAGGCGTTGCAAGAGGTTCTGGCTCGCAAAAGATCGGGGCATTTGTGAATCTTGGATCATTTTATTTTGTGGGAGTTCCTTCTGCAGTGGTGTTAGCTTTTGTTTTACATATGAAAGGGAAGGGCCTTTGGTTGGGGATTATCTTTGCATTCATCATGCAAGTGATACTTTTTGGTGTCATTACCATTCAAACTAGCTGGGAGAAAGAAGCAAATAAGGCAGCAATAAGAGTCAGAAACACCAAAATCCCTCTGGAGATGCCCGAGGGAGATCCAATTATCGTCTCAGAATTGGATTGA 1425 0.4239 MKGVSRQEVGEEVKQQLRLAGPLFTVGLLQYSLQVISVMFVGHLGELPLSAASVATSFASVTGFNLLMGMASALDTLCGQSFGAGLHNMLGIHMQRATFVLSFVSVFLAIMWAFAKHILVAMHQQVAIAEEAGVYTLYMIPSLFAYGVLQCLLKFLNSQTIVVPMMLVSAMVALFHILLCWMLVTKSGLGSKGAAIANSVSYWLTVMLIALYVKFSSSCEKSWTGFSKKALQDIPEFLKISIPSAVMLCLKVWTFELMVLLSGLLPNPQLETSVLSICLNTFSIAWMIPFGLSCAVSTRVSNELGAGHPQAASLAVQVALFMSFVEGVMIVLLMIQLRKIWGNLYSSETEVIKYVAAMMPILAISSFLDGIQSVLSGVARGSGSQKIGAFVNLGSFYFVGVPSAVVLAFVLHMKGKGLWLGIIFAFIMQVILFGVITIQTSWEKEANKAAIRVRNTKIPLEMPEGDPIIVSELD* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1015 474 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 454 - -
Apr6g1015 474 CDD MATE_eukaryotic 12 448 IPR045069 GO:0042910|GO:1990961
Apr6g1015 474 TIGRFAM matE: MATE efflux family protein 22 419 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr6g1015 474 PANTHER PROTEIN DETOXIFICATION 5 454 - -
Apr6g1015 474 Pfam MatE 22 182 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr6g1015 474 Pfam MatE 243 405 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1015 Apr-Chr6 14845910 14848796 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1015 K03327 - gmx:100794717 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1015 6 14845910 14848796 Apr2g1546 2 21352480 21355133 ECH
Apr6g1015 6 14845910 14848796 Apr6g1015 6 14845910 14848796 ECH