Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0976 ATGTCTGTTGCTTCTTTCTTCTCATCTTCTTCTCTATTTCCCTTTTCTCTTCCGTTAAACAACAACTACAAGATCAAGATCATCAAAGGCCGCGTGATGGGTCTCTTCCTTTCTAGGAATTTGGCTTGCAAATTCTTCTACCCTTTTCTCTTATCTGAGAAAATTTCTAAGGATTTGTTTCCTAAGCAGTTGGAAAACATGATGTGTTTGGTGTCTCCTCGTACTGGCAGACATTTGCAACGCTATGACAATGGGTGTCGCCAAGTTGTGGGATGCATTCCTTATAGATACAAGGACAATGAAACAAAAGACAAGGAATTAGAGGTTCTTGTGATTAGTGCTCAGAAAGGTCTTGGAATGCAGTTTCCAAAGGGAGGTTGGGAAACTGATGAATCCATGGAGCAAGCTGCTTTAAGAGAGACCATAGAAGAAGCTGGTGTTGTTGGCAGTGTTGAAAGTAAATTGGGTAAATGGTATTATAAGAGCAAACGCCAACCCATAGAACATGAGGGATACATGTTCCCTATGCTTGTTAAGAAGGAGTTGGATAACTGGCCAGAGATGAACACAAGAAAAAGACAATGGATGACTGTGGCTGAAGCAAAAGAAAGATGCCCTTATGCTTGGATGAAGGAAGCTTTGGATGAATTGGTCAGCAGACAAAGTCAACTCGCAAATGGGTTGGGATATAAATTGTAG 699 0.4106 MSVASFFSSSSLFPFSLPLNNNYKIKIIKGRVMGLFLSRNLACKFFYPFLLSEKISKDLFPKQLENMMCLVSPRTGRHLQRYDNGCRQVVGCIPYRYKDNETKDKELEVLVISAQKGLGMQFPKGGWETDESMEQAALRETIEEAGVVGSVESKLGKWYYKSKRQPIEHEGYMFPMLVKKELDNWPEMNTRKRQWMTVAEAKERCPYAWMKEALDELVSRQSQLANGLGYKL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0976 232 SUPERFAMILY Nudix 81 224 IPR015797 -
Apr6g0976 232 ProSitePatterns Nudix box signature. 125 146 IPR020084 GO:0016787
Apr6g0976 232 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 50 227 - -
Apr6g0976 232 CDD Nudix_Hydrolase_9 88 211 - -
Apr6g0976 232 Pfam NUDIX domain 106 214 IPR000086 -
Apr6g0976 232 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 73 221 - -
Apr6g0976 232 ProSiteProfiles Nudix hydrolase domain profile. 85 218 IPR000086 -
Apr6g0976 232 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 50 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0976 Apr-Chr6 14360860 14362495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0976 K07766 - gmx:100777839 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0976 6 14360860 14362495 Apr2g1597 2 21731983 21733544 ECH
Apr6g0976 6 14360860 14362495 Apr6g0976 6 14360860 14362495 ECH
Apr2g1597 2 21731983 21733544 Apr6g0976 6 14360860 14362495 PCT