Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1597 ATGAAACCGTTACCGCCATTTTTGCCCCTCCCATTTTCATGTCTTTGCTTCTTAATTTTCTTCTTCTTTCTCATCCATTCTCCGCTCTTTCTCTTCATCCACCCCTCAAGTTTTGATTTTGATTTATCCTTTGTTTCCCTCCAACAAGTTGACTTCATGGGTATCTTCTTTTCTCGGAATTTGACTTCCAATTTTTTCCTACCGTTTCTTTTCTCCAAGAAAGTTTCTGGGGATTTGTTCCCCAAGGAGCTCGAGCACATGATGTGCTTTGTTGCTCGCAGTGGCAGGCATTTGCAACGTTATGATGATGGCTGTCGCCAAGTTGTGGGGTGCATTCCATATAGATACAACGGAAACGGAACCCCAAAGAACGAATTAGAGGTTCTTGTGATTAGTGCTCAGAACGGCAATGGAATGCAGTTTCCTAAGGGAGGTTGGGAGATAGATGAATCCATGGAGGAAGCTGCTTTAAGGGAGACCATAGAGGAAGCTGGGGTCACTGGCAACGTCGAAAGTAAATTGGGTAAATGGTTTTATAAGAGCAAACGCCAAGACATTGTCCACGAGGGATATATGTTCCCTTTGCTTGTCAAGAAGCAGTTGGAGAATTGGCCAGAGAAGAATGTTAGAAAACGAAGATGGATGTCTGTTGGTGAAGCAAAGCAAGTGTGTCCACATTCCTGGATGAATGAGGCTTTAGATGTATTGGTCAGTAGACAACCTCAATCCTAG 732 0.4358 MKPLPPFLPLPFSCLCFLIFFFFLIHSPLFLFIHPSSFDFDLSFVSLQQVDFMGIFFSRNLTSNFFLPFLFSKKVSGDLFPKELEHMMCFVARSGRHLQRYDDGCRQVVGCIPYRYNGNGTPKNELEVLVISAQNGNGMQFPKGGWEIDESMEEAALRETIEEAGVTGNVESKLGKWFYKSKRQDIVHEGYMFPLLVKKQLENWPEKNVRKRRWMSVGEAKQVCPHSWMNEALDVLVSRQPQS* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1597 243 CDD Nudix_Hydrolase_9 107 230 - -
Apr2g1597 243 Pfam NUDIX domain 125 221 IPR000086 -
Apr2g1597 243 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 91 239 - -
Apr2g1597 243 SUPERFAMILY Nudix 95 238 IPR015797 -
Apr2g1597 243 ProSiteProfiles Nudix hydrolase domain profile. 104 237 IPR000086 -
Apr2g1597 243 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 70 242 - -
Apr2g1597 243 ProSitePatterns Nudix box signature. 144 165 IPR020084 GO:0016787
Apr2g1597 243 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 70 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1597 Apr-Chr2 21731983 21733544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1597 K07766 - gmx:100800531 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0976 6 14360860 14362495 Apr2g1597 2 21731983 21733544 ECH
Apr2g1597 2 21731983 21733544 Apr2g1597 2 21731983 21733544 ECH
Apr2g1597 2 21731983 21733544 Apr6g0976 6 14360860 14362495 PCT