Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0710 ATGAGAGAGAACAACGTTGTGCTCGCGCAGGAGCAAGAGAATTACGGATCGGGGCTTTTTCGTCATTTCAAGGACGAAATCTTGAGGCCATTCATGAAATCGTTGTCGAGATCCACCGTGGTCCTAGTCTTCCCCGTCGTCCTCATCGTCGGCGCGTTGGTCTACACGCGCATGCTGGACACACATCCGATTATTTCTGGAGCTTCATCTACCAAATCAACACTATCCACCAAAACATATGGCATTCGACCAAACGAACTCTTGAAGCAAATAGAGATCCCATTGAACTGCAATGCACACAATCTCACAGGAAAATGTCCCACCAACAAATATCCAACATTCTCAGATCAAGACCGTTTACAAAGTGCCACGTGTCCAGAATTCTTCCGTTGGATCCACGAGGACTTGAGGCCATGGAGCCACAAGGGCATAACAAGAGAGATGGTAGAGAAGGCAAAAGCAACTGCTAATTTCAAGTTAGTAATTTTGAAGGGTAAAGCTTATTTAGAGACATATGAAAAAGCTTTTCAAACGAGGGATGTTTTCACGTTGTGGGGGATTCTACAATTATTAAGGAAGTATCCTGGAATGGTGCCTGATTTAGAGCTCATGTTTGATTGTGTTGATTGGCCTGTAGTTTCAGCAGATGGGTCTAATGCTGAGGTTCCACCACCTCTCTTTCGTTATTGTGGCAATGATGCTACCTTAGATATTGTCTTCCCTGATTGGTCCTTCTGGGGATGGCCTGAGGTAAATGTAAAGCCATGGGAGATTTTGTTGGGAGAGTTGAAAGAGGGTACTGCGAGGATACCATGGCTGAACAGAGAGCCTTATGCTTACTGGAAGGGTAATCCTGCTGTTGCTGAAACAAGACAAGATCTCATGAAATGCAATGTTTCTGACACACAAGATTGGAATGCTCGTTTATATGCCCAGGATTGGGGACGAGAATCACAAGAGGGGTACAAGAAATCAGACTTGGCAAGCCAATGCACTCATAGATACAAGGTGTACATTGAAGGTTCTGCTTGGTCAGTCAGTGAAAAGTACATTTTGGCATGCGATTCTGTGACTTTATTAGTGAAACCCCATTACCATGATTTTTTCACAAGAGGATTAATTCCAGTGCACCACTATTGGCCCATTAAGGAAGATGACAAGTGCAAGTCCATTAAGTTTGCTGTGGATTGGGGAAACAGTCACAACCAAAGGGCACATAGTATTGGGAAGGCAGCAAGTAATTTCATTCAAGAAGAGTTAAAGATGGATTATGTGTATGACTACATGTTTCATCTCCTAAATTCTTATGCCAAACTCTTTACATACAAACCCTCTATTAGTGCTAATGCTACTGAACTATGTGTGGAGTCAATGGTTTGTGGAGCAGAAGGGGTAGAAAAGAAGTTTATGATGGAATCATTGGTGAAGGGTCCTTCAAACACCAATCCCTGCTCCATGCCTCCTCCTTATGACCCTCCATCTTTGCTTGCTCAATTAAAGAGAAAAGAAGTTTCAATTCAACAAGTTGAGTCATGGGAGAAAAGTTTCTGGGAGAGGCAAAATACGAAATCTTAA 1575 0.4298 MRENNVVLAQEQENYGSGLFRHFKDEILRPFMKSLSRSTVVLVFPVVLIVGALVYTRMLDTHPIISGASSTKSTLSTKTYGIRPNELLKQIEIPLNCNAHNLTGKCPTNKYPTFSDQDRLQSATCPEFFRWIHEDLRPWSHKGITREMVEKAKATANFKLVILKGKAYLETYEKAFQTRDVFTLWGILQLLRKYPGMVPDLELMFDCVDWPVVSADGSNAEVPPPLFRYCGNDATLDIVFPDWSFWGWPEVNVKPWEILLGELKEGTARIPWLNREPYAYWKGNPAVAETRQDLMKCNVSDTQDWNARLYAQDWGRESQEGYKKSDLASQCTHRYKVYIEGSAWSVSEKYILACDSVTLLVKPHYHDFFTRGLIPVHHYWPIKEDDKCKSIKFAVDWGNSHNQRAHSIGKAASNFIQEELKMDYVYDYMFHLLNSYAKLFTYKPSISANATELCVESMVCGAEGVEKKFMMESLVKGPSNTNPCSMPPPYDPPSLLAQLKRKEVSIQQVESWEKSFWERQNTKS* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0710 524 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 34 522 - -
Apr6g0710 524 Pfam Glycosyl transferase family 90 122 513 IPR006598 -
Apr6g0710 524 SMART cap10 197 443 IPR006598 -
Apr6g0710 524 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 34 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0710 Apr-Chr6 11094525 11101954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0710 - - gmx:100789969 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1348 10 25795940 25799737 Apr6g0710 6 11094525 11101954 ECH
Apr6g0710 6 11094525 11101954 Apr6g0710 6 11094525 11101954 ECH