Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1348 ATGACGAGTTGGATTTTCTGCTCCATCATCACCTTGGTTCTTTTTGTTTCAAGCACTTTCTTCCTGGAAATTGACCTTTCTAAATTTACAAGCAATACTCTACTGAAGACAATTATAATCTTCAACAAGCAACAACTACAATTCCCACTTAATTGCACTGATGGGAAATCAGCAGCAACATGCCCATCATACTACCCAACAAAATTTGAGCTTGATGATGAATCATCAACTGCATCATGTCCAGAGTATTTCAGATGGATCCATGAAGATCTTAAACCATGGGAGAGATCTGGAATTACAAGGGATATTGTGGAAAGAGGGAAGAACATTTCACATTTTAGGCTTGTAATTGTAAATGGAAAAGCTTATGTAGAAAAATATTCCAAATCATTTCAGACAAGGGATGTGTTCACAATATGGGGAATTTTACAACTTCTAAGATTGTACCCAGGAAAGATACCAGATTTGGAGCTAATGTTTCAATGTGGGGACAAGACTGTGGTGAACAAAGGAATTTTCCAAGGACCACCTGCCATGTCACCTCCCCCTGTGTTCCATTACTGTGGAGATGAAAATTCTTATGACATTGTGTTCCCTGATTGGACCTTCTGGGGTTGGGCTGAGCTCAACATAAGACCATGGGAAGCAACATTATATAATATCCAAGAAGGCAACAAGATGATCCAATGGAAGGATAGGATACCCTATGCATTTTGGAAAGGCAACCCAGCAGTGTCTAATATTAGGAAAGAACTTGGCAAGTGCAATGCCACAGACAAACAAGATTGGAATGCCAGAATATATGGCATACAATGGCTGCAGGAGAAAGCAAGTAATTTTGAGAACACAAAACTAGAAAATCAATGTACCTATAGATATAAGATCTATGCAGAAGGAGCTACATGGTCTGTTAGTGAAAAGTACATAATAGCATGTGATTCAATGACTATGTTCATAGAGCCTAGGTATTATGATTTCTTCACAAGAAACATGTTACCTTTGAAGCACTACTGGCCTATCAGCCCCAAAAATATGTGTGAAGAGATTAAGTATGCAGTGGACTGGGGAAATGCTCACCTTGACAATGCACAGGCGATTGGCAATGGAGGAACAAATTACATAGTAGAGAACTTAAAGATGAAGCTTGTATATGATTATATGTTTCATCTATTAAATGGGTATGCAAAGCTCTTGAAATTCAAACCAACCATACCAAAAGGAGCTATTGAGATTTGTTCTGAAAGTATGGCATGTTCCTTGCGTGGTGTAAGGAAGCATTTTATGGTTGAGTCTATGGTGAATTCACCAAGTGATACACCTCCATGTGCCATGCCTCCTCCTTATACAACTCAATCTCTCAAAGAGTTTCTTAAGGAAAAGGAAAATCTAATTGAACAAGTAAAGAAAAGAGCAGTGAATAAAGGCTAG 1428 0.3838 MTSWIFCSIITLVLFVSSTFFLEIDLSKFTSNTLLKTIIIFNKQQLQFPLNCTDGKSAATCPSYYPTKFELDDESSTASCPEYFRWIHEDLKPWERSGITRDIVERGKNISHFRLVIVNGKAYVEKYSKSFQTRDVFTIWGILQLLRLYPGKIPDLELMFQCGDKTVVNKGIFQGPPAMSPPPVFHYCGDENSYDIVFPDWTFWGWAELNIRPWEATLYNIQEGNKMIQWKDRIPYAFWKGNPAVSNIRKELGKCNATDKQDWNARIYGIQWLQEKASNFENTKLENQCTYRYKIYAEGATWSVSEKYIIACDSMTMFIEPRYYDFFTRNMLPLKHYWPISPKNMCEEIKYAVDWGNAHLDNAQAIGNGGTNYIVENLKMKLVYDYMFHLLNGYAKLLKFKPTIPKGAIEICSESMACSLRGVRKHFMVESMVNSPSDTPPCAMPPPYTTQSLKEFLKEKENLIEQVKKRAVNKG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1348 475 Coils Coil 450 470 - -
Apr10g1348 475 PANTHER GLYCOSYLTRANSFERASE FAMILY 90 PROTEIN 4 474 - -
Apr10g1348 475 Pfam Glycosyl transferase family 90 76 469 IPR006598 -
Apr10g1348 475 SMART cap10 152 401 IPR006598 -
Apr10g1348 475 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 4 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1348 Apr-Chr10 25795940 25799737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1348 - - gmx:100813234 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1348 10 25795940 25799737 Apr10g1348 10 25795940 25799737 ECH
Apr10g1348 10 25795940 25799737 Apr6g0710 6 11094525 11101954 ECH