Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0505 ATGGGGAATGACGTATTTGATGGGCAGATATTAGCAGAGAAGTTGTGGAAACTCAACAATTCTCAACAAAGCATTGAATCATTATCCCGCTTGTGTGTTTCTCACCGGAAGAGAGCAAAAGAGATAGTTGAAACATGGGATAAATTGTTCAGCTCTTCGCAGAAAGAGCAGCGCATCTCTTTTCTATACTTGGCGAATGACATATTGCAAAATAGTAGAAGGAAGGGCAGTGAATTCGTTAATGAATTCTGGAAAGTTCTTCCCACATCTCTCAGGCGTGTTTATGAAAGCGATGAGCTTGGAAAGAAAGTAGTAACCAGACTTTTTGATGTATGGGAGGAGAGGAAGGTTTTTGGTTCACGCGGTCAGGTTCTTAAAGATGAAATAATGGGTAAGAATACACTTCCATCATCTACAAGCAACGGGAAAAGTTCAAATCCTATCAAGATAGTGAAGAGGGATGCCCACTCTGTGAGATTAAAATTGGCTGTTGGGTGCTTACCAGAAAAGATACTCACATCATTGCATTCTATTCATGACAAACATCTTAGTGAGGAAGCTGCGCTGGACAAGTGTAATACTGTTGTACATCAAGTGGATAAACTTGTAGAAGATGCTGAAAATACATTGGCTCAAGGAAATCAGCTGGGATCCACATTTGTAAATGACTTGCAAGAGCAGGAAGAGGAACTCAAACAATATATGGTGCATCTTGAAACTGCTGAGGCGGACAGGGCTAGTTTGCTTTCCCAACTTAAAGATGCACTGCAGGAACAGGAATCAAGGCAACATCTTCTTCACAACCAGTTACTGGCTGCACGAGGCCTGATTGAGCAAGTAGCCAGTATCAGGAAGAGGCTTGGCCTAGCACCAGAAGGCACAAGGGTGTTGGAGCAAAATCTTCCTTCAGTTCAACAACCAAACAGTACTCCTCTTCAGCCTTCTTTTTCCCAACCTTCTATTTCTTTTGCTCCTCTTCAAACTACTGAAGAAGATAAGAAAGCAGCAGCAGCTGCTGTTGCTGCTAAGCTTGCTGCCTCTACATCCTCTGCCCTTATGCTCACATCTGTTCTTTCTTCCCTCGTTGCTGAAGAAGCTGCCTCTATGAATGGTAGCTTAAATTCTACTGGGTTTCCTGTTTTCAATCCAGAGAAAAGACCCAAACTTGAAAAACAAATACCTGTTTCTGAGGTTAATAGTAATGATACAGGGAGCTCTTCTTTTTTCAGCACTTTACAAAAATCATCAGTGGCAAATGTGTCACTAACACAATCAGCCAGCTTGCAACCCATATCGCAACCCAATCAATTACAAGCTGCATTTGCTTCAGGTCCCCCACCCCCTCCTCATTCCCCAGTGAGTCCACCAGCAAATCAGTATGTTCAATCTACTGGATTGATGGTTGGGGGAATTCCTTATGCATATGGATCAAACAACCTACCACCTCCACCTCCTTTACCTCCTCATGTGGCAATGGGGTTGTCGAGGCCCAGCACTCAGCCATCACAATCACAAGCTCAGCAAGCGCAGCAGCAACAGCAGTCATCGACTGGAGGATTTTACAGGCCTCCAGGCATAGGTTTTTATGGGCAAAGCCATTCATCAACATCAGCCGCGCCACTACCTAGACCGTGA 1635 0.4398 MGNDVFDGQILAEKLWKLNNSQQSIESLSRLCVSHRKRAKEIVETWDKLFSSSQKEQRISFLYLANDILQNSRRKGSEFVNEFWKVLPTSLRRVYESDELGKKVVTRLFDVWEERKVFGSRGQVLKDEIMGKNTLPSSTSNGKSSNPIKIVKRDAHSVRLKLAVGCLPEKILTSLHSIHDKHLSEEAALDKCNTVVHQVDKLVEDAENTLAQGNQLGSTFVNDLQEQEEELKQYMVHLETAEADRASLLSQLKDALQEQESRQHLLHNQLLAARGLIEQVASIRKRLGLAPEGTRVLEQNLPSVQQPNSTPLQPSFSQPSISFAPLQTTEEDKKAAAAAVAAKLAASTSSALMLTSVLSSLVAEEAASMNGSLNSTGFPVFNPEKRPKLEKQIPVSEVNSNDTGSSSFFSTLQKSSVANVSLTQSASLQPISQPNQLQAAFASGPPPPPHSPVSPPANQYVQSTGLMVGGIPYAYGSNNLPPPPPLPPHVAMGLSRPSTQPSQSQAQQAQQQQQSSTGGFYRPPGIGFYGQSHSSTSAAPLPRP* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0505 544 Pfam CID domain 10 120 IPR006569 -
Apr6g0505 544 ProSiteProfiles CID domain profile. 3 134 IPR006569 -
Apr6g0505 544 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 543 - -
Apr6g0505 544 SMART 558neu5 10 130 IPR006569 -
Apr6g0505 544 MobiDBLite consensus disorder prediction 478 544 - -
Apr6g0505 544 Gene3D - 4 130 IPR008942 -
Apr6g0505 544 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 1 543 - -
Apr6g0505 544 SUPERFAMILY ENTH/VHS domain 12 117 IPR008942 -
Apr6g0505 544 MobiDBLite consensus disorder prediction 495 520 - -
Apr6g0505 544 MobiDBLite consensus disorder prediction 438 460 - -
Apr6g0505 544 MobiDBLite consensus disorder prediction 441 455 - -
Apr6g0505 544 Coils Coil 221 269 - -
Apr6g0505 544 CDD CID_RPRD_like 9 130 - -
Apr6g0505 544 MobiDBLite consensus disorder prediction 529 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0505 Apr-Chr6 6072372 6098560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0505 K15559 - gmx:100791478 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0505 6 6072372 6098560 Apr6g0505 6 6072372 6098560 ECH
Apr4g1585 4 17716926 17736987 Apr6g0505 6 6072372 6098560 ECH