Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1585 ATGGGTAGCACATTCAATCCACAGATTTTAGTGGAAAAACTGGCCAAGCTGAATGGTTCACAGACGAGTATAGAGACTTTGTCGCATTGGTGCATTTTTCATATGAACAAAGCCAAACAAGTTGTTGAAACATGGGATAGACAATTTCATTGTTCTCCTCGTGAGAAGAGATTGGCATTTCTCTATCTTGCAAATGATATTTTACAGAACAGCAGGAGAAAGGGTTCTGAATTTGTAGGTGAATTCTGGAAGGTTCTTCCAGATGCTCTTCGAGACGTGATTCAAAGTGGAGATGATTTTGCTAGAAATGCAGCACTTCGGCTGATTGGTATATGGGAAGAGAGAAAAGTTTTTGGTTCTCGTGGTCAAATTCTAAAGGAAGAGTTTGTTGGGAGGCATGTGGAAAATAATAGCCGTGATGTGAAACCTGTGAACATGAAACTGAGGCCATCTGCGGGGAATGCATTGGAGAAAATAGTTTCTGGTTATCATGTTGTTTATGGAGGGCAAACAGATGAAGATGCTGTGTTGAGCAAATGCAGGAATGCCATTAGCTGTCTTGAGAAAGCAGATAAGGAAATAGGTCATGATGGTAATTCAGGGCGATTCCATGGATCTGCACTAGTGGATGAGCTCCAGGGGCATAGTGCTGCATTAAAGGACTGCATCGAGCAATTAACAACCATAGAATCATCAAGAGCTAGTCTTGTGTCTCACTTGAGGGAAGCTCTCCAGGATCAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGCTGCACGTGTTCAATCAGAGCAGGCAGGTAATACCTGCCGGCAGTTGCTGAATGCCAACAATATTCAGTCAGTAGCTGAACAGAACTCAAAGGAAATTCAAACATCCATGGCCCCTTCAAGTTTTGTTATTTCTGGTGATAGAGAGCAATCAGCTCCATTAATGTATGCACCGCAAGTGTCGTTTCCTCAAAAATCTGGACACACTGAGGAAGATCCACGTAAGTCTGCTGCTGCAGCAGTGGCGGCTAAACTGACTGCTTCAACATCCTCCGCACAAATGCTATCTTATGTGCTGTCCTCCCTAGCATCAGAAGGCGTCATAGGCAATCCAATGAAAGAGTCTTCTGCTGATTATCAGTCTGAGAAGAGGACCAAGCTGGAGAATGACCAGCCAGCTTACATCCCATCTCAGAATCCTCAACAACCACTTCCTCCCTTTTCGGTTTCTGAGTCTATCCAACATAATGCACCTACAACTAACCAGCAATCTACCCCCATTGAGCCACCACCTCCACCCTCGTCATCACCTCCCCCATTGCCACCACTACCACCAATGCCTCAGTATCCCGTGCCACAGTTCATGCAGACTGCTGGATCCATTAGCAGTATGGCATACAGCTATGGCATGACACAACAGCCATCAATGGCAGCCTATCCAGGCGTTGGGGCTTCCCTGAATGGTGTTTCCCCTTTTACCCCCCCATTGGGTACATATCAGGGTTTTCAGGGTTCAGATGGAAATTACTATAATCAACCCTCATCAATGCCTATGGCCCCAATATCTCGACAATAA 1572 0.4536 MGSTFNPQILVEKLAKLNGSQTSIETLSHWCIFHMNKAKQVVETWDRQFHCSPREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIQSGDDFARNAALRLIGIWEERKVFGSRGQILKEEFVGRHVENNSRDVKPVNMKLRPSAGNALEKIVSGYHVVYGGQTDEDAVLSKCRNAISCLEKADKEIGHDGNSGRFHGSALVDELQGHSAALKDCIEQLTTIESSRASLVSHLREALQDQEFKLGQVRSQIQAARVQSEQAGNTCRQLLNANNIQSVAEQNSKEIQTSMAPSSFVISGDREQSAPLMYAPQVSFPQKSGHTEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNPMKESSADYQSEKRTKLENDQPAYIPSQNPQQPLPPFSVSESIQHNAPTTNQQSTPIEPPPPPSSSPPPLPPLPPMPQYPVPQFMQTAGSISSMAYSYGMTQQPSMAAYPGVGASLNGVSPFTPPLGTYQGFQGSDGNYYNQPSSMPMAPISRQ* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1585 523 MobiDBLite consensus disorder prediction 496 523 - -
Apr4g1585 523 SUPERFAMILY ENTH/VHS domain 12 117 IPR008942 -
Apr4g1585 523 SMART 558neu5 9 130 IPR006569 -
Apr4g1585 523 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 523 - -
Apr4g1585 523 MobiDBLite consensus disorder prediction 403 422 - -
Apr4g1585 523 PANTHER OS01G0925000 PROTEIN 1 523 - -
Apr4g1585 523 Pfam CID domain 9 120 IPR006569 -
Apr4g1585 523 Gene3D - 2 129 IPR008942 -
Apr4g1585 523 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Apr4g1585 523 MobiDBLite consensus disorder prediction 390 452 - -
Apr4g1585 523 CDD CID_RPRD_like 7 128 - -
Apr4g1585 523 MobiDBLite consensus disorder prediction 423 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1585 Apr-Chr4 17716926 17736987 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1585 K15559 - gmx:100806108 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1585 4 17716926 17736987 Apr4g1585 4 17716926 17736987 ECH
Apr4g1585 4 17716926 17736987 Apr6g0505 6 6072372 6098560 ECH