Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0467 ATGGGGCGCATGAACACAGTTTTCTTGGTGATGGTGGCTATCTTGATGGCCAAGGAGGCCTTAGCAGCACAACATGTTGTTGGTGGAAGCCAAGGTTGGGATCCATCCACAGACCTTAACACATGGAGTTCAGGGCAAACGTTCAAGGTTGGAGATAAACTTGTTTTCAAGTACTCTTCTTTACATAGTGTGGTTGAGTTAAGCAGCGAAAGTGCCTATAAGAAGTGTGATATTAGCAGCCCAGTCAAGTCCTTGAGTAGTGGCAACGATGTTGTTAAACTAGACAAGGCAGGTACAAGGTACTTCACCTGTGGTACCTTGGGTCACTGTAGTCAAGGCATGAAGGTGAAGATTACAACAGTAAAAGGGAATGCACCTTCCCCTGCATCGTCACCATCATCATCATCATCATCACCGTTATCATCACCTTCTACTTCCTCTTCTTCTTCTACTTCTACCGATGCATCTTCAGCCTCACAATGCTTTGCTTCTTTTGTGTTCATTGTTGCATTTTTGGCTACAACAATGATTTCCTTGTTTTAA 543 0.4383 MGRMNTVFLVMVAILMAKEALAAQHVVGGSQGWDPSTDLNTWSSGQTFKVGDKLVFKYSSLHSVVELSSESAYKKCDISSPVKSLSSGNDVVKLDKAGTRYFTCGTLGHCSQGMKVKITTVKGNAPSPASSPSSSSSSPLSSPSTSSSSSTSTDASSASQCFASFVFIVAFLATTMISLF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0467 180 Gene3D - 21 126 IPR008972 -
Apr6g0467 180 ProSiteProfiles Phytocyanin domain profile. 23 122 IPR003245 GO:0009055
Apr6g0467 180 SUPERFAMILY Cupredoxins 22 120 IPR008972 -
Apr6g0467 180 MobiDBLite consensus disorder prediction 123 152 - -
Apr6g0467 180 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Apr6g0467 180 MobiDBLite consensus disorder prediction 122 152 - -
Apr6g0467 180 CDD Phytocyanin 23 119 - -
Apr6g0467 180 PANTHER BLUE COPPER PROTEIN 6 136 IPR039391 GO:0009055
Apr6g0467 180 PANTHER BNAA06G32330D PROTEIN 6 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0467 Apr-Chr6 5508697 5509908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0467 3 121 Miscellaneous Gene Families AT3G27200 63.636 3.06e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0467 - - gmx:100306337 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0467 6 5508697 5509908 Apr6g0467 6 5508697 5509908 ECH
Apr6g0467 6 5508697 5509908 Apr4g1642 4 19128638 19129433 PCT