Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1642 ATGGGGTGCAAGATCACAATTTTCATGGCATTGAGTGTTGCTTTGATCATAAAAGTTGTCATGGCAGAACAACATGTTGTTGGTGGAAGCCAAGGTTGGGATGAATCCACAGATTTTAACTCTTGGGTTTCAGGCCAAAGATTTAAGGTTGGCGATCAACTTGTTTTCAAGTACTCTTCAGGATTGCATAGTGTGGTTGAATTAGGCAACGAGAGTGACTACAAGAATTGTGGCCTTGGCAATGCAGTGAACTCTATGAGTAGTGGCAATGATGTTGTAAAACTGAACAAACCTGGTACACGTTACTTTGCATGTGGAACCTTGGGTCATTGTAGTCAAGGCATGAAGGTGAAGATTAAAACGGTGTCTGGGAATGCACCCTCTTCCCCTTCATCTTCGTCATCATCTTCTTCATTCTCACAAGGCTTAATCACTGTTGCACTCTTTGTTTCATTGTTGATTGCCTCTCTCCTTCCCCAGTTTTGA 486 0.4239 MGCKITIFMALSVALIIKVVMAEQHVVGGSQGWDESTDFNSWVSGQRFKVGDQLVFKYSSGLHSVVELGNESDYKNCGLGNAVNSMSSGNDVVKLNKPGTRYFACGTLGHCSQGMKVKIKTVSGNAPSSPSSSSSSSSFSQGLITVALFVSLLIASLLPQF* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1642 161 Gene3D - 21 127 IPR008972 -
Apr4g1642 161 PANTHER BLUE COPPER PROTEIN 9 135 IPR039391 GO:0009055
Apr4g1642 161 SUPERFAMILY Cupredoxins 21 121 IPR008972 -
Apr4g1642 161 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
Apr4g1642 161 CDD Phytocyanin 24 120 - -
Apr4g1642 161 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Apr4g1642 161 PANTHER BNAA06G32330D PROTEIN 9 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1642 Apr-Chr4 19128638 19129433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1642 5 122 Miscellaneous Gene Families AT3G27200 63.559 2.58e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1642 - - aprc:113863608 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1642 4 19128638 19129433 Apr4g1642 4 19128638 19129433 ECH
Apr6g0467 6 5508697 5509908 Apr4g1642 4 19128638 19129433 PCT