Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0466 ATGACTCCACTGGGCTTGTTGGGTTTTTCTGCATTGACCCTTTGTTCCTTTGGCTTTGCAGCAGTGCCTCATCAAACACAAGCATCAAACCGTGACTTTTTTGGTAGAAAAAACATTGTTGCTGAACATTCTCCTGAAGGCTTATGCGTCTCTTCGGTCACTGTTCAAGGCTACACATGTCAGGAACATGAAGTTACAACCCAAGATGGGTACATTCTTAGCCTTCAAAGGATCCCTGAAGGTCGAGGTGAGGTTATTGGTCGTGGAATTAAGAAGCAGCCAGTGATAATACAGCACGGAGTATTAGTAGATGGAATGTCATGGCTTCTGAATCCTCCAGAGCAAAACCTGCCTTCGATTCTTGCTGATAATGGCTTCGATGTGTGGATTGCTAACGCCAGAGGAACAAGATATAGCCACAGACACACCTCACTCGACCCCTCTAGCCAGGCCTATTGGGATTGGTCTTGGGATGAAATGGTTACTTATGATCTCCCAGCTATTTTTTATTATGTGTCCACCCAAACAGGGCAGAAGATAAATTACGTTGGCCATTCTTTGGGGACTTTGGTAGCTTTGGCATCCTTCTCGGAAGGGAAATTGGTGAATCAGCTAAAATCAGCAGCAATGTTGAGTCCAGTTGCCTATTTGAGCTACATGAAGACAGCACTTGGAGTTATTGCTGCCAAATCCTTTGTTGGTGAGATCATTACCAAAATCGGCGTGGCAGAGTTTGATCCTAAAGGGTTACCTATTGTTAAATTTATCAACTCTCTTTGCCTTCAACCCGGGGTAGACTGCAAGGACTTCCTTACAGCAATAACCGGTGACAACTGCTGCCTTAATTCCTCAACAGTTGATCTATTCATCATGAATGAACCTCAGCCAACATCAACAAAGAACATGGTGCACTTATCTCAAACTGTTAGAAGTGGGGTTTTGACAAAATTCAACTATGAGAAGCCAGACATTAATATTAAGCATTATGGAGCAGTAAACCCTCCAATCTATAACCTTTCAAATATCCCCCAAAACCTCCCTCTCTTCCTAAGTTATGGGGGTAAAGAAGCACTTTCTGATGATATTGATGTGAGGAATTTACTTGATGACATTAAGTTCCATGATGTAGACAAGCTAAGTGTTCAGTTTGTCAAGGACTATGCTCATGCTGACTACATTATGGCATTCAATGCCAAGGACATAGTGTACAATGCTGTTACAGAATTTTTCAAGCATCAATTTTAA 1245 0.4225 MTPLGLLGFSALTLCSFGFAAVPHQTQASNRDFFGRKNIVAEHSPEGLCVSSVTVQGYTCQEHEVTTQDGYILSLQRIPEGRGEVIGRGIKKQPVIIQHGVLVDGMSWLLNPPEQNLPSILADNGFDVWIANARGTRYSHRHTSLDPSSQAYWDWSWDEMVTYDLPAIFYYVSTQTGQKINYVGHSLGTLVALASFSEGKLVNQLKSAAMLSPVAYLSYMKTALGVIAAKSFVGEIITKIGVAEFDPKGLPIVKFINSLCLQPGVDCKDFLTAITGDNCCLNSSTVDLFIMNEPQPTSTKNMVHLSQTVRSGVLTKFNYEKPDINIKHYGAVNPPIYNLSNIPQNLPLFLSYGGKEALSDDIDVRNLLDDIKFHDVDKLSVQFVKDYAHADYIMAFNAKDIVYNAVTEFFKHQF* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0466 414 SUPERFAMILY alpha/beta-Hydrolases 55 411 IPR029058 -
Apr6g0466 414 PIRSF Steryl_ester_lip 6 414 IPR025483 GO:0016788
Apr6g0466 414 Gene3D alpha/beta hydrolase 42 412 IPR029058 -
Apr6g0466 414 PANTHER LYSOSOMAL ACID LIPASE-RELATED 22 413 - -
Apr6g0466 414 PANTHER TRIACYLGLYCEROL LIPASE 2 22 413 - -
Apr6g0466 414 Pfam Partial alpha/beta-hydrolase lipase region 54 111 IPR006693 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0466 Apr-Chr6 5500944 5507666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0466 48 411 Acyl Lipid Metabolism Gene Families AT2G15230 36.264 1.66e-92 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0466 K01052 - gmx:100779460 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0466 6 5500944 5507666 Apr6g0466 6 5500944 5507666 ECH
Apr4g1641 4 19122154 19126872 Apr6g0466 6 5500944 5507666 PCT