Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1641 ATGGCTCTTGTAATGCATTTTGCTGCTTTGACCCTCTATCTCTTAGTCTCAGCAATTGTGTCTCATGAAGCACACGCTTCAAGCCGTGGCTCCTTTGGCAAAATCGTCAACCCTGCAATGTATGGTATATGTGCCTCTTCTGTCATTATTTACGGGTACAAGTGTGAGGAACATGAGGTTACAACCAAAGATGGGTACATTCTGAGTCTGCAAAGGATCCCACAAGGTCGAGGTGAAGTTGGTGGGAATGGGAGGAAGCAACCAGTGATAATACAGCATGGAGTACTTGTGGATGGTATGACATGGCTTCTGAACCCACCAGAGCAAGATCTACCCTTGATTTTAGCTGATAATGGCTTTGACGTGTGGATTGCTAACACCAGAGGAACCAGATATAGCCGCCGACATACTTCATTGGACCCTTCTAGCCCGGCCTTTTGGAATTGGTCTTGGGATGAACTTGTTTCCTATGATCTACCTGCCGGGTTTGATTACGTGTTCAGCCAAACGGGGCACAAGATTAATTACATTGGCCATTCTCTGGGAACTTTGATAGCTTTGGCGTCCTTCTCAGAAGGGGAATTGGTTAATCAGGTGAAATCAGCAGCTTTGTTGAGCCCAATTGCCTATTTAAGCCACATGACCACCGCACTTGGTGTCGTTGCGGCCAAGTCCTTTGTTGGGGAGATCACTACCCTATTTGGTCTGGCAGAATTTAATCCAAAAGGGTTACCTGTTGATGCCTTTCTCAAGTCTCTCTGTGCTCACCCTGGGATAGACTGCTACGATTTGATGGCTGCACTAACTGGTAAAAATTGCTGCCTCAATTCTTCAACTGTTGATCTATTCTTGATGAATGAACCTCAGTCAACATCAACAAAGAACATGGTGCACTTGGCTCAGATTGTTAGAAATGGGGTCTTGACAAAATTCAATTACGTTATACCAGACTATAATATTAAGCATTATGGAGAAATATTCCCTCCAATCTATAACCTTTCCAATATTCCCCGTGATCTCCCTCTCTTCATTAGCTACGGGGGTGCAGATGCTCTTTCAGATGTTCGTGATGTTGAGAATTTACTTGATATACTCAAGTTCCATGATGAGGATAAGCGTAGTGTTCAGTTCATCAAGGACTATGCTCATGCTGACTACATTATGGGCTTCAATGCCAAGGACTTAGTGTATAATGCTGTTATTTCATTTTTCAATCATCAAGTTAACACCTGA 1233 0.4355 MALVMHFAALTLYLLVSAIVSHEAHASSRGSFGKIVNPAMYGICASSVIIYGYKCEEHEVTTKDGYILSLQRIPQGRGEVGGNGRKQPVIIQHGVLVDGMTWLLNPPEQDLPLILADNGFDVWIANTRGTRYSRRHTSLDPSSPAFWNWSWDELVSYDLPAGFDYVFSQTGHKINYIGHSLGTLIALASFSEGELVNQVKSAALLSPIAYLSHMTTALGVVAAKSFVGEITTLFGLAEFNPKGLPVDAFLKSLCAHPGIDCYDLMAALTGKNCCLNSSTVDLFLMNEPQSTSTKNMVHLAQIVRNGVLTKFNYVIPDYNIKHYGEIFPPIYNLSNIPRDLPLFISYGGADALSDVRDVENLLDILKFHDEDKRSVQFIKDYAHADYIMGFNAKDLVYNAVISFFNHQVNT* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1641 410 PIRSF Steryl_ester_lip 1 409 IPR025483 GO:0016788
Apr4g1641 410 Pfam Partial alpha/beta-hydrolase lipase region 49 105 IPR006693 GO:0006629
Apr4g1641 410 PANTHER TRIACYLGLYCEROL LIPASE 2 7 407 - -
Apr4g1641 410 Gene3D alpha/beta hydrolase 34 406 IPR029058 -
Apr4g1641 410 SUPERFAMILY alpha/beta-Hydrolases 51 405 IPR029058 -
Apr4g1641 410 PANTHER LYSOSOMAL ACID LIPASE-RELATED 7 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1641 Apr-Chr4 19122154 19126872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1641 8 410 Acyl Lipid Metabolism Gene Families AT2G15230 37.685 1.43e-92 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1641 K01052 - gmx:100779460 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1641 4 19122154 19126872 Apr6g0466 6 5500944 5507666 PCT