Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0462 ATGGTTCTAGGCATGAGAGGAAAGAACAGGAGAAGTGTCATCGTTCAAATTGATTACCTCATTCATATTCAGGAGATTAAGCCATGGCCTCCATCACAATCTCTAAGATCCCTTCGTTCAGTGTTGATAGAGTGGAAGAATGGTGAATGTGCATCAGGTTCTACCAATCTTGTTGCCCCTTCGCTTGGTTCGGTTATAGGCGAAGGGAGAATCGAATTTAATGAGTCATTTAGGCTTCATGTAACTTTGATGAGGGATATGTCTGTAAGAGGTGGTGAAGCTGATGTGTTCCAAAAGAATTGCTTAGAGTTCAACTTGTATGAGCCTCGTAGAGATAAGATTGTAAAGGGTCAGTTGTTGGGCAGTGCCATCATAGACTTGGCAGATTATGGTACACTTAAAGAGACCTTGAGCACTAGTGTGCCTATGAACTGCAAGAGAAGTTACAGGAACACAGATCAGCCACTTTTGTTCATTAAAATTCAGCCTGTTGAGAGGATTCGTGCTAGTCCCTCATTGAAGGACAATAATGGCGGTGATTCTGTATCGACACTGATGAATGAAGAATATGCTGAGGAAGCTGAGATTGCCTCTTTTACTGATGATGATGTCTCCTCACATTCATCTGCGGCTGCAGTTTCTGCTTCCCATGAGTCCAGTGAGTTTAACCCTCCGAAATTGGAAAAGTCATTGCAATTGCAGAATGAACCAAATGGACATGATAGAAGCACCGGTGTGAATGACAAAGAACGTCCCTTGGCTTCAGAAATGGGGCTTAAAAACTTGAATATGGTGCAACAAGGTTCATCTTACATGGATGTCTCTTCTTTTATCAAGAGTCCGGTAAATGATCATGGTTCTATGTCAACCTCTCCTAACCGTAATTCTTTGTCGATCCAAAAGCATGTTGCTTCACCTAGCGCTGATTCTTCTTCCCTGTACTTGGATGTAAATTCTAGGAGCAGGACAATAAGCAGTGGTCATGAAAATTTAGACCAGATTTTTCATGAAAAGGTTGGTAACTACAGAAATATAGTTGCAGCTGTTAAAAGAAACAATACCGGAAGTACTTTTAACGGCTATTCAAATCACACATCATCTGAATGTGATGACAAATTAAATGGGAGAAGCAAGGAAGATGACAAATATTTTGTGAAGGAGGGAGGAGGTAAAAAAATTTGCTATGGCTCTGTTGAGGACATAAATGGAAATGAAAATTCTAATTTGGATAGGCAAAACTGCATGGAAGATGAACAATTGGTAGCACAAGTTGCCAAAGATCAATCCTTATTAGGTAGTAATTCATGTTCTTTTGGTGGGTCAAATATTGGTATCCAGGGAAATGTTCTCAGAAGTGAAAGACTAAAGAACTTTAAATCTGTGAAGTTACCAGCAGACTCGGCTAGGAATGCTGGAACACCTGGTAGCGATCATCACGCTGAAGTAAATGAAGATGACATTCTTGGAGATGCACAAAGCAATGGAGGGAACAGAAGCAATGACGGAAGAGATGCTAAGATTTATCTGAAGGAAACGAAAAATGTTGATGGAAAAATAGGGCATTTGGAAAAGAAAATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCTGCTATTGAGGCTGCTTTGTATTCAGTAGTTGCTGAGCATGGAAGCTCCATGAGTAAGGTTCACGCCCCAGCTCGACGCCTTTCCAGGCTCTATCTTCATGCTTGTAAAGAAAATCTTCAGGGAAGAAAGGCTGGAGCAGCTAAAAGTTCTGTTTCAGGATTAGTGCTTGTTACAAAGGCATGTGGAAATGATGTCCCAAGGTTGACCTTTTGGTTGTCTAATACTATAGTGTTGAGAACAATTATAAGCCGAACCGCGAAAGATTTTGTTCCAGCAGCTGGATCTATTAGGAGAAGAAAGACCGAAGGAGAGAGGAATGTCAAGATAACATCCACAATAAGGTTGAAAGGACTAAACACTGGAAAAAATGAAAATACAGAATTAGGGTATGGAGGTTTTGGTAACTGGGATGATCCCCAGGTGTTCATGTTAGCACTGCAAAAGGTGGAAGCATGGATCTTCTCTCGCATTGTAGAATCTAACTGGTGGCAGACTTTGACTCCACATATGCAGAATACAAGTTTGACCAACATGGAAGTGGGTTCTGTTTCAAGAAAAAACTACAGAAGGACATCTAGCTCATGTGATCAAGAGCAGGGTAACCTGTCACTATATATTTGGAAGAATGCCTTTAGAGAAGCTTCTGAAAGACTCTGTCCTATTCGAGCTGGAGGGCATGAGTGTGGTTGTCTGTCTATGCTTCCTAGATTGATAATGGAGCAGTGTGTGGCAAGATTAGATGTGGCTATGTTCAATGCTATTCTTCGTGAGTCTGACAATGAAATACCAACTGATCCTATATCTGATGCTATTAGTGATCCCAAGGTTCTCCCCATTCCACCTGGGAAATCAAGCTTTGGAGCTGGTGCACAGCTAAAATCCGTGATTGGGAACTGGTCTAGATGGTTGACTAATCTATTTGGCATGGATGATGATGACTCAATTGAAGATAAAGCTGATTCTGAGAGCAATGATGAGAGACAAAAAGCATCCTTCAAGCCCTTCAGTCTTCTTAATGCACTAAGTGACCTCCTGATGCTTCCTAAGGACATGCTGTTAAGTGCATCCATCAGGAATGAGGTATGCCCGATGTTTAATGCACCACTCATTAAGAAGATTCTAGACAATTTTGTCCCAGATGAGTTTTGCCCTGATCCTGTTCCCTCTAATGTTTTTGAAGCTCTGAACTCAGAGAATGATATGGAAGATGGAAAGGAGTCCGTGAAAAACATTCCATGCATTGCAGCTTCGATTGTGTATTCACCTCCACCAGCAACCTCCATTGCAAGCATTGTTGGGGAGATGGGAAGCAAATCTCAGCTAAGAAGAAACAGATCTTCTGTTGTTAGGAAGTCATACACCAGTGATGATGAGCTTGATGAATTGAAGTCCCCATTGTCTTCAATATTCTTGAGTGTTTCAACAAAATCCAGCTTGAAATTCAAAGAAAATCGCAATGAATCTCCTGTCAGATATGAACTCCTCAGGGATGTGTGGATGAACAGCGAGTGA 3123 0.4127 MVLGMRGKNRRSVIVQIDYLIHIQEIKPWPPSQSLRSLRSVLIEWKNGECASGSTNLVAPSLGSVIGEGRIEFNESFRLHVTLMRDMSVRGGEADVFQKNCLEFNLYEPRRDKIVKGQLLGSAIIDLADYGTLKETLSTSVPMNCKRSYRNTDQPLLFIKIQPVERIRASPSLKDNNGGDSVSTLMNEEYAEEAEIASFTDDDVSSHSSAAAVSASHESSEFNPPKLEKSLQLQNEPNGHDRSTGVNDKERPLASEMGLKNLNMVQQGSSYMDVSSFIKSPVNDHGSMSTSPNRNSLSIQKHVASPSADSSSLYLDVNSRSRTISSGHENLDQIFHEKVGNYRNIVAAVKRNNTGSTFNGYSNHTSSECDDKLNGRSKEDDKYFVKEGGGKKICYGSVEDINGNENSNLDRQNCMEDEQLVAQVAKDQSLLGSNSCSFGGSNIGIQGNVLRSERLKNFKSVKLPADSARNAGTPGSDHHAEVNEDDILGDAQSNGGNRSNDGRDAKIYLKETKNVDGKIGHLEKKIKMLEGELREAAAIEAALYSVVAEHGSSMSKVHAPARRLSRLYLHACKENLQGRKAGAAKSSVSGLVLVTKACGNDVPRLTFWLSNTIVLRTIISRTAKDFVPAAGSIRRRKTEGERNVKITSTIRLKGLNTGKNENTELGYGGFGNWDDPQVFMLALQKVEAWIFSRIVESNWWQTLTPHMQNTSLTNMEVGSVSRKNYRRTSSSCDQEQGNLSLYIWKNAFREASERLCPIRAGGHECGCLSMLPRLIMEQCVARLDVAMFNAILRESDNEIPTDPISDAISDPKVLPIPPGKSSFGAGAQLKSVIGNWSRWLTNLFGMDDDDSIEDKADSESNDERQKASFKPFSLLNALSDLLMLPKDMLLSASIRNEVCPMFNAPLIKKILDNFVPDEFCPDPVPSNVFEALNSENDMEDGKESVKNIPCIAASIVYSPPPATSIASIVGEMGSKSQLRRNRSSVVRKSYTSDDELDELKSPLSSIFLSVSTKSSLKFKENRNESPVRYELLRDVWMNSE* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0462 1040 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 1040 - -
Apr6g0462 1040 Coils Coil 519 539 - -
Apr6g0462 1040 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 16 140 IPR019448 -
Apr6g0462 1040 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
Apr6g0462 1040 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 1040 IPR021827 GO:0005643
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0462 Apr-Chr6 5412999 5420011 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0462 - - gmx:100818584 1479.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0462 6 5412999 5420011 Apr6g0462 6 5412999 5420011 ECH
Apr4g1651 4 19330193 19337040 Apr6g0462 6 5412999 5420011 PCT