Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1651 ATGAAAGGAAAGAACAGGAGAAGTGGTGGTGCTATTCATATGGATTACCTCATTCACATTCAGGAGATTAAGCCTTGGCCCCCTTCACAATCTCTTAGATCCCTTCGTTCTGTATTGATACAATGGGAGAATGGTGAACGCTCTTCAGGGTCTACCTGTCTTGTTTCCCCTTCAGTTGGTTCTAATTCGGTCGCAGGTGAAGGAAAACTCGAGTTCAATGAGTCATTTAGGCTTCCAGTGACACTGTTGAGGGATATGACTGTCAGAAATAGTACTGTTGATATGTTCCAAAAGAACTGTTTGGAGTTGAGCTTGTATGAGACTCGTAGAGATAAGACCATTAAAGGTCAGTTGTTGGGTACTGCCATTATAGATTTGGCTGATTGTGGCATACTTAGAGAGACCTTGAGCATACGTACACCATTGAATTGCCAGAGGAACTACAGAAACATGGATCAGCCACTTTTGTTCATTCAAATTGAGCCAGTTGGAAAGAATCGTGCTAGGTCTGCATTGAAAGAAAGCTTGTCAAAGGAGGTGTCAAAGGACAAAAACGGTGGTGATTCAGTATCGGTGATAATGAATGGAGAATTTGGTGACGAAGCTGAGATTGCCTCTTTTACTGATGATGATGTTTCCTCACATTCATCTGTGGCTGGAGTTACTGCTTCCTCAGAGTCTAGTGTGTGTATGCCTCCCGAACATGAAGAGAATGCACCACATGGACCAGCACAAAACAATGGTAGGAATGACATGGAGCATCCCTTGGCTTCAGAGACAAGCGTTGAAAAGTTGAATGTGATGCAAGAAGACACATATGATAGACTGGAGGGGAGTTCTTCCTATGATGTATCCTCTGATGTTGGGAGTCCAGTACATGGTCATACTCCGAAGACTACTACTCCCAATCATAGATCAGTGACCCGAAACCAAGTTGTTTCCTCAAATGGTGATTCTTCTTCCCCATCAATGGAAGAAACTTCCAGAAGCAGGGATCATGAAAATTTGGATCAAGTGGGTTGTAAAAAGGTAGCAAATTGTAGAAGTGTAGTTGCAGGTGTTCAAACAAACCTTAATGGAAGTGCTTGTGACATCTATTCAAGCAATGCTACATTTCTAGATAGTAATTGCTTTGTGGACGAGAACCCAGGACCTGGTTCAGAAACCAATGACAAATTAAGTGAGAGATGTGAGGAAGCTGACAAAAATTGTGTGAAGGAGGGGGGGAGTGATAAATATTACCACAATTCCATTGAGGATAAGCTTGGAAATGAAGTATTAAATTTTGATAAGCAATACCATGTAGAAGATGAATCAGTTGCACAAGGTACAAAAGATCAAGTTTTATTGAGTAGCAATTCATATTCTTTAGGTCGGTCAGATAATGGTATAAAAGGAAATTTTCTGAAAAGTGAAAGATTAAAGCATGTGAAGTCTGTAAGGTCATCCGCAGATTCAGCTAGGAGTACTGGGTCACTGGGTAGCAATCATCTTACTGAAGTAAAGGAAAATGGTGTTAATGGAAATGGCCAAAATATTGGAGGGAACAACAGAAGCAGTGACAGAAAAGATGCCAAGATTTATCCAAGGGAAGCCAGAACTGCCATTTTAGACAGCAGGATCGAGCACTTGGAAAACAAGATAGAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCTGCTATTGAGGCTGCTTTATATTCAGTAGTTGCTGAGCATGGAAGCTCCATGAGTAAGGTTCATGCCCCTGCTCGGCGCCTTTCCAGGCTGTACCTTCATACTTGTAAAGAAAATCTTCTAGCTAGAAGATCTGGGGCAGCCAAGAGTGCTGTTTCTGGGTTAGTCCTTGTTGCAAAGGCATGTGGAAATGATGTCCCAAGGTTGACATTTTGGTTGTCCAATTCTGTTGTGCTGAGAACAATTATAAGCAAAGCTACCAAAGACATGACACCATCAAATCCTGCTGGACCTATTACAAGAAGGATGAATGGAGAAGCGAATGGCAAGATAGCACAACCATTAATATGGAGGGGGTTCTCTCCTAGGAAAAGTGAAAATACAGCAGTTGAATATGGAGGTATTGGTAACTGGGAAGATCCAAACATGTTTACATCAGCATTGGAAAAGGTGGAAGCTTGGATCTTCTCCCGCATCGTGGAATCTATTTGGTGGCAGTCTTTGACTCCACATATGCAGCTGGCTGATGCAAAGGTCACTCATGAGGATGCATGTAAAAGCTCTAGGAACATGTCTAGCTCATGTGATCAAGGGCAGGAAAATTTATCGCTAGATATTTGGAAGAATGCTTTTAGGGAAGCCTGTGAAAGGCTCTGTCCTATCCGAGCTGGAGGGCATGAGTGTGGCTGTTTGTCTGTGCTGCCTAGATTGATAATGGAGCAATGTGTAGCAAGATTAGATGTTGCCATGTTCAATGCCATTCTTCGTGAATCTGTTGATGATATTCCAACTGATCCTGTATCTGATCCCATTAGCGATCCTAAGGTTCTCCCCATTCCGCCTGGTAAATCAAGCTTTGGAGCTGGTGCACAGCTTAAAACTGCGATTGGTAACTGGTCTAGATGGCTAACTGACCTATTTGGTATGGATGAGGATGACTCACTTGAGGATAGAGATGATGACCTTGACAGCAATGACGGAAGTCAAAATACATCCTTCAAGTCCTTTCATCTTCTTAATGCATTAAGTGACCTCTTGATGCTTCCTAAGGATTTGCTGTTAAGTGCATCCATCAGGAAAGAGGTCTGCCCAATGTTTAGTGCTTCACTAATCAAGAAGATTCTAGACAATTTCGTCCCAGATGAGTTTTGCCCGGAACCTATTCCCACTGTTGTTTTTGAAGCTCTGTCGTCACAGGATGATCTCGACGATGAAAAGGAGTCTGTGAACAACTTCCCATGCATGGCTGCTCCCATTGCATATTCGCCTCTGCCAGCAACTACCATTACAAGCATTACTGGGGAAATTGGAAGTGAATCTCAGCTGAGAAGAAGCAGATCTTCTGTTGTGAGGAAGTCATACACTAGCGATGATGAGCTCGATGAATTAAGCTATCCATTATCTTCGATATTCATTAGTGGCTCCTCCCCAGTATTGGCCAAACCCAACTGGAAGTGGAAAGACAATCGTGATGAATCTGCCTTCAGATATGAACTCCTGAGAGATGTTTGGATGAACAGTGAATGA 3201 0.4261 MKGKNRRSGGAIHMDYLIHIQEIKPWPPSQSLRSLRSVLIQWENGERSSGSTCLVSPSVGSNSVAGEGKLEFNESFRLPVTLLRDMTVRNSTVDMFQKNCLELSLYETRRDKTIKGQLLGTAIIDLADCGILRETLSIRTPLNCQRNYRNMDQPLLFIQIEPVGKNRARSALKESLSKEVSKDKNGGDSVSVIMNGEFGDEAEIASFTDDDVSSHSSVAGVTASSESSVCMPPEHEENAPHGPAQNNGRNDMEHPLASETSVEKLNVMQEDTYDRLEGSSSYDVSSDVGSPVHGHTPKTTTPNHRSVTRNQVVSSNGDSSSPSMEETSRSRDHENLDQVGCKKVANCRSVVAGVQTNLNGSACDIYSSNATFLDSNCFVDENPGPGSETNDKLSERCEEADKNCVKEGGSDKYYHNSIEDKLGNEVLNFDKQYHVEDESVAQGTKDQVLLSSNSYSLGRSDNGIKGNFLKSERLKHVKSVRSSADSARSTGSLGSNHLTEVKENGVNGNGQNIGGNNRSSDRKDAKIYPREARTAILDSRIEHLENKIEMLEGELREAAAIEAALYSVVAEHGSSMSKVHAPARRLSRLYLHTCKENLLARRSGAAKSAVSGLVLVAKACGNDVPRLTFWLSNSVVLRTIISKATKDMTPSNPAGPITRRMNGEANGKIAQPLIWRGFSPRKSENTAVEYGGIGNWEDPNMFTSALEKVEAWIFSRIVESIWWQSLTPHMQLADAKVTHEDACKSSRNMSSSCDQGQENLSLDIWKNAFREACERLCPIRAGGHECGCLSVLPRLIMEQCVARLDVAMFNAILRESVDDIPTDPVSDPISDPKVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGMDEDDSLEDRDDDLDSNDGSQNTSFKSFHLLNALSDLLMLPKDLLLSASIRKEVCPMFSASLIKKILDNFVPDEFCPEPIPTVVFEALSSQDDLDDEKESVNNFPCMAAPIAYSPLPATTITSITGEIGSESQLRRSRSSVVRKSYTSDDELDELSYPLSSIFISGSSPVLAKPNWKWKDNRDESAFRYELLRDVWMNSE* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1651 1066 MobiDBLite consensus disorder prediction 479 525 - -
Apr4g1651 1066 MobiDBLite consensus disorder prediction 483 518 - -
Apr4g1651 1066 MobiDBLite consensus disorder prediction 275 324 - -
Apr4g1651 1066 ProSiteProfiles C2 NT-type domain profile. 4 164 IPR019448 -
Apr4g1651 1066 MobiDBLite consensus disorder prediction 275 335 - -
Apr4g1651 1066 MobiDBLite consensus disorder prediction 209 231 - -
Apr4g1651 1066 Coils Coil 534 561 - -
Apr4g1651 1066 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 2 1066 IPR021827 GO:0005643
Apr4g1651 1066 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 14 128 IPR019448 -
Apr4g1651 1066 MobiDBLite consensus disorder prediction 209 254 - -
Apr4g1651 1066 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 2 1066 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1651 Apr-Chr4 19330193 19337040 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1651 - - gmx:100783487 1612.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1651 4 19330193 19337040 Apr4g1651 4 19330193 19337040 ECH
Apr4g1651 4 19330193 19337040 Apr6g0462 6 5412999 5420011 PCT