Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0080 ATGTCGACCTCTTCCATAAACGGGTGGTGCCTCTCTTCTATCTCTCCTTCCAAAACTTCTGTTAGAAGGGCCACATTGCGTCCTTCAGTCTTTGCAACACTTACCACTTCTTCATCTTCTTCCTCTTCCTCGTCTTTCCCTTCTCTTATTCAAGACAAGCCTGTTTTTGCTGCTCCTGCCCCCATCATCAACCCCATTGTGAGAGAGGATATGGGGAAGGACTATGAGGAAGCTATTGAAGAACTTCAGAAATTGTTAAGGGAGAAAGGTGAACTGAGAGCCACAGCAGCTGAAAGAGTTGAGCAGATAACAGCACAGCTGGGGACACCATCATCTGAAGTCACCCTCCCACCATCTGAAGCCTCAGAGAGGATCAAAGCTGGTTTCCTTTACTTCAAGAAAGAGAAATATGAGTTAAATCCAGCTTTGTTTGGTGAACTTGCCAAAGGCCAGAGTCCAAAGTTTATGGTGTTTGCTTGCTCAGACTCCAGAGTTTGTCCATCTCATGTGCTAGATTTTCAGCCTGGAGAGGCCTTTATGGTCAGAAATGTTGCCAACATGGTCCCACCATATGACCAGACAAAGTACTCTGGAGTTGGTGCTGCCATTGAGTATGCTGTTTTGCATCTCAAGGTGTCCAACATTGTGGTCATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTTTATCTTTCCCTTACGATGGAACCTACTCTACTGATTTTATTGAGGAGTGGGTCAAAATTGGCTTACCTGCAAAGGCAAAGGTGAAAGCACAACATGGGGATGCACCTTTTGCAGAGCTATGCACACACTGTGAGAAGGAAGCTGTGAATGTTTCCCTTGGAAACTTGCTAACCTACCCATTTGTTAGAGATGGATTGGTGAACAATACATTGGCACTGAAAGGAGGATACTATGACTTTGTTAAAGGATCTTTTGAGCTCTGGGGCCTTCAATTTGGCCTTGCTTCCTCTTTCTCCGTAAAAGATGTGGCCACCATTCTGCATTGGAAGCTATAG 1023 0.4526 MSTSSINGWCLSSISPSKTSVRRATLRPSVFATLTTSSSSSSSSSFPSLIQDKPVFAAPAPIINPIVREDMGKDYEEAIEELQKLLREKGELRATAAERVEQITAQLGTPSSEVTLPPSEASERIKAGFLYFKKEKYELNPALFGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNVANMVPPYDQTKYSGVGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPYDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNVSLGNLLTYPFVRDGLVNNTLALKGGYYDFVKGSFELWGLQFGLASSFSVKDVATILHWKL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0080 340 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 329 - -
Apr6g0080 340 SUPERFAMILY beta-carbonic anhydrase, cab 122 323 IPR036874 GO:0004089|GO:0008270
Apr6g0080 340 SMART Pro_CA_2 148 318 IPR001765 GO:0004089|GO:0008270
Apr6g0080 340 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 204 224 IPR015892 GO:0004089|GO:0008270|GO:0015976
Apr6g0080 340 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 160 167 IPR015892 GO:0004089|GO:0008270|GO:0015976
Apr6g0080 340 Coils Coil 68 95 - -
Apr6g0080 340 CDD beta_CA_cladeB 128 317 IPR045066 GO:0004089|GO:0008270
Apr6g0080 340 Gene3D Carbonic anhydrase 110 329 IPR036874 GO:0004089|GO:0008270
Apr6g0080 340 PANTHER CARBONIC ANHYDRASE 1 329 IPR001765 GO:0004089|GO:0008270
Apr6g0080 340 Pfam Carbonic anhydrase 156 313 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0080 Apr-Chr6 771674 775489 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0080 K01673 - gmx:100500448 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0080 6 771674 775489 Apr6g0080 6 771674 775489 ECH
Apr7g1634 7 23511573 23517030 Apr6g0080 6 771674 775489 ECH
Apr3g0797 3 20892496 20899496 Apr6g0080 6 771674 775489 ECH