Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0797 ATGGCAGGAGAGTCATACGATGAGGCCGTTGCAACGCTGACCAAGCTCATCAGCGAGAAAGCCGATCTCGGAGATGTCGCCGCCGCAAAGATCAAACAGTTGACGGCAGAGCTTGAGGCGAACGGATCGAAACCGTTTAACCCTGACGAGAGGATCCGAACCGGTTTTGCCCATTTCAAGAATGAGAAATTCGAGAAGAATCCGGAATTGTTCGGGGATCTTGCCAAAGGCCAGAGCCCAAAGTTTATGGTGTTTGCTTGCTCAGATTCAAGAGTTTGCCCATCCCATGTTCTGGATTTCCAACCGGGTGAAGCCTTTGTGGTCCGAAATATTGCCAACATGGTTCCACCATATGACAAGACGAAGTATTCAGGAACAGGGGCAGCCATTGAATATGCAGTCTTACATTTAAAGGTGGAGAATATTGTGGTTATTGGACACAGCTGCTGTGGAGGTATAAAAGGCCTCATGTCTATCCCAGACGATGGGACCACTGCAAGTGAATTCATAGAGAACTGGGTCCAAATTTGTACTCCAGCAAAGTCCAAAGTTAAAGCAGAAGCAAGCGAATCAGAATTCTCAGACCAGTGTACCAATTGTGAGAAGGAAGCAGTGAATGTATCACTTGGGAACTTATTTACTTATCCATTTGTGAGAGATGGTGTTGTGAAGAAAACGCTTGCTTTGAAAGGTGCACATTACGATTTCGTTAAGGGCACGTTTGAGCTGTGGGATTTGGACTTCAAAATCTCATGCTCTGTATCCGTTTAA 771 0.4591 MAGESYDEAVATLTKLISEKADLGDVAAAKIKQLTAELEANGSKPFNPDERIRTGFAHFKNEKFEKNPELFGDLAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNIANMVPPYDKTKYSGTGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASEFIENWVQICTPAKSKVKAEASESEFSDQCTNCEKEAVNVSLGNLFTYPFVRDGVVKKTLALKGAHYDFVKGTFELWDLDFKISCSVSV* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0797 256 Pfam Carbonic anhydrase 83 240 IPR001765 GO:0004089|GO:0008270
Apr3g0797 256 CDD beta_CA_cladeB 55 244 IPR045066 GO:0004089|GO:0008270
Apr3g0797 256 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 131 151 IPR015892 GO:0004089|GO:0008270|GO:0015976
Apr3g0797 256 SUPERFAMILY beta-carbonic anhydrase, cab 50 251 IPR036874 GO:0004089|GO:0008270
Apr3g0797 256 SMART Pro_CA_2 75 245 IPR001765 GO:0004089|GO:0008270
Apr3g0797 256 Gene3D Carbonic anhydrase 40 256 IPR036874 GO:0004089|GO:0008270
Apr3g0797 256 PANTHER CARBONIC ANHYDRASE 1 256 - -
Apr3g0797 256 PANTHER CARBONIC ANHYDRASE 1 256 IPR001765 GO:0004089|GO:0008270
Apr3g0797 256 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 87 94 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0797 Apr-Chr3 20892496 20899496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0797 K01673 - gmx:100808326 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0797 3 20892496 20899496 Apr3g0797 3 20892496 20899496 ECH
Apr3g0797 3 20892496 20899496 Apr6g0080 6 771674 775489 ECH